Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0783 and EX28DRAFT_0784 overlap by 22 nucleotides EX28DRAFT_0784 and EX28DRAFT_0785 are separated by 22 nucleotides
EX28DRAFT_0783: EX28DRAFT_0783 - ABC-type phosphate/phosphonate transport system, periplasmic component, at 781,004 to 781,762
_0783
EX28DRAFT_0784: EX28DRAFT_0784 - Transcriptional regulator, at 781,741 to 782,637
_0784
EX28DRAFT_0785: EX28DRAFT_0785 - oxidoreductase alpha (molybdopterin) subunit, at 782,660 to 784,948
_0785
Position (kb) 782
783
784
785 Strain fitness (log2 ratio) -2
-1
0
1
2 at 781.763 kb on + strand at 781.763 kb on + strand at 781.764 kb on - strand at 781.764 kb on - strand at 781.764 kb on - strand at 781.764 kb on - strand at 782.013 kb on + strand, within EX28DRAFT_0784 at 782.201 kb on + strand, within EX28DRAFT_0784 at 782.276 kb on + strand, within EX28DRAFT_0784 at 782.276 kb on + strand, within EX28DRAFT_0784 at 782.360 kb on - strand, within EX28DRAFT_0784 at 782.628 kb on + strand at 782.632 kb on - strand at 782.641 kb on + strand at 782.662 kb on - strand at 782.715 kb on + strand at 782.745 kb on + strand at 782.782 kb on - strand at 782.809 kb on + strand at 782.810 kb on - strand at 782.811 kb on + strand at 782.812 kb on - strand at 782.976 kb on + strand, within EX28DRAFT_0785 at 782.991 kb on + strand, within EX28DRAFT_0785 at 782.991 kb on + strand, within EX28DRAFT_0785 at 782.992 kb on - strand, within EX28DRAFT_0785 at 783.109 kb on + strand, within EX28DRAFT_0785 at 783.109 kb on + strand, within EX28DRAFT_0785 at 783.110 kb on - strand, within EX28DRAFT_0785 at 783.168 kb on + strand, within EX28DRAFT_0785 at 783.730 kb on + strand, within EX28DRAFT_0785 at 783.731 kb on - strand, within EX28DRAFT_0785 at 783.829 kb on + strand, within EX28DRAFT_0785 at 783.829 kb on + strand, within EX28DRAFT_0785 at 783.984 kb on - strand, within EX28DRAFT_0785 at 784.006 kb on + strand, within EX28DRAFT_0785 at 784.007 kb on - strand, within EX28DRAFT_0785 at 784.137 kb on + strand, within EX28DRAFT_0785 at 784.393 kb on + strand, within EX28DRAFT_0785 at 784.393 kb on + strand, within EX28DRAFT_0785 at 784.485 kb on + strand, within EX28DRAFT_0785 at 784.485 kb on + strand, within EX28DRAFT_0785 at 784.485 kb on + strand, within EX28DRAFT_0785 at 784.753 kb on + strand at 784.753 kb on + strand at 784.754 kb on - strand at 784.754 kb on - strand at 784.852 kb on + strand at 784.857 kb on - strand at 784.908 kb on + strand at 784.908 kb on + strand at 784.908 kb on + strand at 784.909 kb on - strand at 784.943 kb on - strand at 785.011 kb on + strand at 785.012 kb on - strand at 785.424 kb on + strand at 785.424 kb on + strand at 785.467 kb on + strand at 785.507 kb on + strand at 785.508 kb on - strand at 785.509 kb on + strand at 785.509 kb on + strand at 785.510 kb on - strand at 785.510 kb on - strand at 785.693 kb on + strand at 785.716 kb on + strand at 785.717 kb on - strand at 785.727 kb on - strand at 785.740 kb on + strand at 785.764 kb on + strand at 785.764 kb on + strand at 785.765 kb on - strand at 785.765 kb on - strand at 785.765 kb on - strand at 785.789 kb on + strand at 785.813 kb on - strand at 785.834 kb on - strand at 785.837 kb on + strand at 785.837 kb on + strand at 785.838 kb on - strand at 785.838 kb on - strand at 785.838 kb on - strand at 785.838 kb on - strand at 785.838 kb on - strand at 785.882 kb on - strand at 785.888 kb on - strand at 785.888 kb on - strand at 785.894 kb on + strand at 785.894 kb on + strand at 785.895 kb on - strand at 785.895 kb on - strand at 785.895 kb on - strand at 785.915 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 781,763 + -0.1 781,763 + +0.8 781,764 - -2.0 781,764 - +0.1 781,764 - -0.2 781,764 - -1.4 782,013 + EX28DRAFT_0784 0.30 +0.0 782,201 + EX28DRAFT_0784 0.51 +0.3 782,276 + EX28DRAFT_0784 0.60 -0.0 782,276 + EX28DRAFT_0784 0.60 +0.8 782,360 - EX28DRAFT_0784 0.69 +0.7 782,628 + +0.6 782,632 - +0.2 782,641 + +1.7 782,662 - +0.2 782,715 + -0.6 782,745 + +0.9 782,782 - +0.4 782,809 + -0.3 782,810 - -0.0 782,811 + -1.4 782,812 - -1.3 782,976 + EX28DRAFT_0785 0.14 +0.0 782,991 + EX28DRAFT_0785 0.14 +0.4 782,991 + EX28DRAFT_0785 0.14 -0.0 782,992 - EX28DRAFT_0785 0.15 -0.1 783,109 + EX28DRAFT_0785 0.20 -0.5 783,109 + EX28DRAFT_0785 0.20 +0.6 783,110 - EX28DRAFT_0785 0.20 -0.1 783,168 + EX28DRAFT_0785 0.22 -0.3 783,730 + EX28DRAFT_0785 0.47 -0.0 783,731 - EX28DRAFT_0785 0.47 +1.2 783,829 + EX28DRAFT_0785 0.51 -0.7 783,829 + EX28DRAFT_0785 0.51 -1.1 783,984 - EX28DRAFT_0785 0.58 -0.4 784,006 + EX28DRAFT_0785 0.59 +0.4 784,007 - EX28DRAFT_0785 0.59 -0.9 784,137 + EX28DRAFT_0785 0.65 -0.4 784,393 + EX28DRAFT_0785 0.76 -2.3 784,393 + EX28DRAFT_0785 0.76 -0.4 784,485 + EX28DRAFT_0785 0.80 +0.2 784,485 + EX28DRAFT_0785 0.80 +0.9 784,485 + EX28DRAFT_0785 0.80 +0.0 784,753 + -0.6 784,753 + -0.2 784,754 - -0.5 784,754 - -1.3 784,852 + -0.0 784,857 - -0.2 784,908 + +0.3 784,908 + +0.2 784,908 + -0.1 784,909 - +0.3 784,943 - +0.9 785,011 + +0.4 785,012 - +0.0 785,424 + +1.2 785,424 + +0.0 785,467 + +1.1 785,507 + -1.1 785,508 - -1.0 785,509 + +0.4 785,509 + -0.6 785,510 - -0.3 785,510 - +1.6 785,693 + +1.1 785,716 + +0.6 785,717 - +0.2 785,727 - +0.7 785,740 + +0.1 785,764 + -0.4 785,764 + -0.1 785,765 - -0.9 785,765 - +0.4 785,765 - +0.3 785,789 + +0.7 785,813 - +0.4 785,834 - -0.2 785,837 + +0.9 785,837 + +0.2 785,838 - +0.6 785,838 - +0.8 785,838 - +0.8 785,838 - -0.6 785,838 - -0.3 785,882 - +0.1 785,888 - +0.4 785,888 - +0.8 785,894 + -0.0 785,894 + -0.6 785,895 - +1.1 785,895 - -0.3 785,895 - +1.8 785,915 - -0.2
Or see this region's nucleotide sequence