Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0782 and EX28DRAFT_0783 overlap by 8 nucleotides EX28DRAFT_0783 and EX28DRAFT_0784 overlap by 22 nucleotides EX28DRAFT_0784 and EX28DRAFT_0785 are separated by 22 nucleotides
EX28DRAFT_0782: EX28DRAFT_0782 - Fatty acid desaturase, at 779,959 to 781,011
_0782
EX28DRAFT_0783: EX28DRAFT_0783 - ABC-type phosphate/phosphonate transport system, periplasmic component, at 781,004 to 781,762
_0783
EX28DRAFT_0784: EX28DRAFT_0784 - Transcriptional regulator, at 781,741 to 782,637
_0784
EX28DRAFT_0785: EX28DRAFT_0785 - oxidoreductase alpha (molybdopterin) subunit, at 782,660 to 784,948
_0785
Position (kb) 781
782
783 Strain fitness (log2 ratio) -2
-1
0
1
2 at 780.765 kb on + strand, within EX28DRAFT_0782 at 780.811 kb on + strand, within EX28DRAFT_0782 at 780.811 kb on + strand, within EX28DRAFT_0782 at 780.812 kb on - strand, within EX28DRAFT_0782 at 780.812 kb on - strand, within EX28DRAFT_0782 at 780.868 kb on + strand, within EX28DRAFT_0782 at 780.932 kb on + strand at 781.031 kb on + strand at 781.032 kb on - strand at 781.032 kb on - strand at 781.032 kb on - strand at 781.032 kb on - strand at 781.242 kb on - strand, within EX28DRAFT_0783 at 781.242 kb on - strand, within EX28DRAFT_0783 at 781.348 kb on + strand, within EX28DRAFT_0783 at 781.349 kb on - strand, within EX28DRAFT_0783 at 781.763 kb on + strand at 781.763 kb on + strand at 781.764 kb on - strand at 781.764 kb on - strand at 781.764 kb on - strand at 781.764 kb on - strand at 782.013 kb on + strand, within EX28DRAFT_0784 at 782.201 kb on + strand, within EX28DRAFT_0784 at 782.276 kb on + strand, within EX28DRAFT_0784 at 782.276 kb on + strand, within EX28DRAFT_0784 at 782.360 kb on - strand, within EX28DRAFT_0784 at 782.628 kb on + strand at 782.632 kb on - strand at 782.641 kb on + strand at 782.662 kb on - strand at 782.715 kb on + strand at 782.745 kb on + strand at 782.782 kb on - strand at 782.809 kb on + strand at 782.810 kb on - strand at 782.811 kb on + strand at 782.812 kb on - strand at 782.976 kb on + strand, within EX28DRAFT_0785 at 782.991 kb on + strand, within EX28DRAFT_0785 at 782.991 kb on + strand, within EX28DRAFT_0785 at 782.992 kb on - strand, within EX28DRAFT_0785 at 783.109 kb on + strand, within EX28DRAFT_0785 at 783.109 kb on + strand, within EX28DRAFT_0785 at 783.110 kb on - strand, within EX28DRAFT_0785 at 783.168 kb on + strand, within EX28DRAFT_0785
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 780,765 + EX28DRAFT_0782 0.77 -0.7 780,811 + EX28DRAFT_0782 0.81 +0.3 780,811 + EX28DRAFT_0782 0.81 -0.6 780,812 - EX28DRAFT_0782 0.81 -0.2 780,812 - EX28DRAFT_0782 0.81 +0.1 780,868 + EX28DRAFT_0782 0.86 +1.8 780,932 + +0.2 781,031 + +0.3 781,032 - +0.3 781,032 - +0.6 781,032 - -0.2 781,032 - -0.5 781,242 - EX28DRAFT_0783 0.31 -0.7 781,242 - EX28DRAFT_0783 0.31 -0.9 781,348 + EX28DRAFT_0783 0.45 -0.5 781,349 - EX28DRAFT_0783 0.45 -1.8 781,763 + -0.1 781,763 + +0.8 781,764 - -2.0 781,764 - +0.1 781,764 - -0.2 781,764 - -1.4 782,013 + EX28DRAFT_0784 0.30 +0.0 782,201 + EX28DRAFT_0784 0.51 +0.3 782,276 + EX28DRAFT_0784 0.60 -0.0 782,276 + EX28DRAFT_0784 0.60 +0.8 782,360 - EX28DRAFT_0784 0.69 +0.7 782,628 + +0.6 782,632 - +0.2 782,641 + +1.7 782,662 - +0.2 782,715 + -0.6 782,745 + +0.9 782,782 - +0.4 782,809 + -0.3 782,810 - -0.0 782,811 + -1.4 782,812 - -1.3 782,976 + EX28DRAFT_0785 0.14 +0.0 782,991 + EX28DRAFT_0785 0.14 +0.4 782,991 + EX28DRAFT_0785 0.14 -0.0 782,992 - EX28DRAFT_0785 0.15 -0.1 783,109 + EX28DRAFT_0785 0.20 -0.5 783,109 + EX28DRAFT_0785 0.20 +0.6 783,110 - EX28DRAFT_0785 0.20 -0.1 783,168 + EX28DRAFT_0785 0.22 -0.3
Or see this region's nucleotide sequence