Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0781 and EX28DRAFT_0782 are separated by 68 nucleotides EX28DRAFT_0782 and EX28DRAFT_0783 overlap by 8 nucleotides EX28DRAFT_0783 and EX28DRAFT_0784 overlap by 22 nucleotides
EX28DRAFT_0781: EX28DRAFT_0781 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 778,910 to 779,890
_0781
EX28DRAFT_0782: EX28DRAFT_0782 - Fatty acid desaturase, at 779,959 to 781,011
_0782
EX28DRAFT_0783: EX28DRAFT_0783 - ABC-type phosphate/phosphonate transport system, periplasmic component, at 781,004 to 781,762
_0783
EX28DRAFT_0784: EX28DRAFT_0784 - Transcriptional regulator, at 781,741 to 782,637
_0784
Position (kb) 779
780
781
782 Strain fitness (log2 ratio) -2
-1
0
1
2 at 778.993 kb on + strand at 778.994 kb on - strand at 778.994 kb on - strand at 779.304 kb on + strand, within EX28DRAFT_0781 at 779.304 kb on + strand, within EX28DRAFT_0781 at 779.305 kb on - strand, within EX28DRAFT_0781 at 779.305 kb on - strand, within EX28DRAFT_0781 at 779.428 kb on + strand, within EX28DRAFT_0781 at 779.428 kb on + strand, within EX28DRAFT_0781 at 779.429 kb on - strand, within EX28DRAFT_0781 at 779.430 kb on + strand, within EX28DRAFT_0781 at 779.430 kb on + strand, within EX28DRAFT_0781 at 779.431 kb on - strand, within EX28DRAFT_0781 at 779.431 kb on - strand, within EX28DRAFT_0781 at 779.560 kb on + strand, within EX28DRAFT_0781 at 779.653 kb on + strand, within EX28DRAFT_0781 at 779.698 kb on - strand, within EX28DRAFT_0781 at 779.903 kb on - strand at 779.916 kb on - strand at 779.916 kb on - strand at 779.980 kb on - strand at 780.012 kb on + strand at 780.013 kb on - strand at 780.013 kb on - strand at 780.147 kb on + strand, within EX28DRAFT_0782 at 780.153 kb on + strand, within EX28DRAFT_0782 at 780.153 kb on + strand, within EX28DRAFT_0782 at 780.157 kb on + strand, within EX28DRAFT_0782 at 780.157 kb on + strand, within EX28DRAFT_0782 at 780.157 kb on + strand, within EX28DRAFT_0782 at 780.157 kb on + strand, within EX28DRAFT_0782 at 780.158 kb on - strand, within EX28DRAFT_0782 at 780.158 kb on - strand, within EX28DRAFT_0782 at 780.244 kb on + strand, within EX28DRAFT_0782 at 780.245 kb on - strand, within EX28DRAFT_0782 at 780.245 kb on - strand, within EX28DRAFT_0782 at 780.245 kb on - strand, within EX28DRAFT_0782 at 780.425 kb on - strand, within EX28DRAFT_0782 at 780.425 kb on - strand, within EX28DRAFT_0782 at 780.425 kb on - strand, within EX28DRAFT_0782 at 780.765 kb on + strand, within EX28DRAFT_0782 at 780.811 kb on + strand, within EX28DRAFT_0782 at 780.811 kb on + strand, within EX28DRAFT_0782 at 780.812 kb on - strand, within EX28DRAFT_0782 at 780.812 kb on - strand, within EX28DRAFT_0782 at 780.868 kb on + strand, within EX28DRAFT_0782 at 780.932 kb on + strand at 781.031 kb on + strand at 781.032 kb on - strand at 781.032 kb on - strand at 781.032 kb on - strand at 781.032 kb on - strand at 781.242 kb on - strand, within EX28DRAFT_0783 at 781.242 kb on - strand, within EX28DRAFT_0783 at 781.348 kb on + strand, within EX28DRAFT_0783 at 781.349 kb on - strand, within EX28DRAFT_0783 at 781.763 kb on + strand at 781.763 kb on + strand at 781.764 kb on - strand at 781.764 kb on - strand at 781.764 kb on - strand at 781.764 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 778,993 + -0.4 778,994 - -1.6 778,994 - -0.2 779,304 + EX28DRAFT_0781 0.40 +0.1 779,304 + EX28DRAFT_0781 0.40 -0.8 779,305 - EX28DRAFT_0781 0.40 -0.4 779,305 - EX28DRAFT_0781 0.40 -0.4 779,428 + EX28DRAFT_0781 0.53 -0.1 779,428 + EX28DRAFT_0781 0.53 -0.3 779,429 - EX28DRAFT_0781 0.53 -0.0 779,430 + EX28DRAFT_0781 0.53 -0.2 779,430 + EX28DRAFT_0781 0.53 -0.3 779,431 - EX28DRAFT_0781 0.53 +0.6 779,431 - EX28DRAFT_0781 0.53 -0.8 779,560 + EX28DRAFT_0781 0.66 +0.1 779,653 + EX28DRAFT_0781 0.76 +1.3 779,698 - EX28DRAFT_0781 0.80 -0.1 779,903 - -0.1 779,916 - -0.5 779,916 - -0.9 779,980 - -0.3 780,012 + +0.1 780,013 - -0.4 780,013 - -0.7 780,147 + EX28DRAFT_0782 0.18 -0.1 780,153 + EX28DRAFT_0782 0.18 -0.8 780,153 + EX28DRAFT_0782 0.18 -0.8 780,157 + EX28DRAFT_0782 0.19 -0.1 780,157 + EX28DRAFT_0782 0.19 +0.1 780,157 + EX28DRAFT_0782 0.19 -0.7 780,157 + EX28DRAFT_0782 0.19 -1.2 780,158 - EX28DRAFT_0782 0.19 +1.1 780,158 - EX28DRAFT_0782 0.19 +0.4 780,244 + EX28DRAFT_0782 0.27 +0.0 780,245 - EX28DRAFT_0782 0.27 -0.8 780,245 - EX28DRAFT_0782 0.27 -0.5 780,245 - EX28DRAFT_0782 0.27 -0.5 780,425 - EX28DRAFT_0782 0.44 -0.6 780,425 - EX28DRAFT_0782 0.44 -0.3 780,425 - EX28DRAFT_0782 0.44 -0.2 780,765 + EX28DRAFT_0782 0.77 -0.7 780,811 + EX28DRAFT_0782 0.81 +0.3 780,811 + EX28DRAFT_0782 0.81 -0.6 780,812 - EX28DRAFT_0782 0.81 -0.2 780,812 - EX28DRAFT_0782 0.81 +0.1 780,868 + EX28DRAFT_0782 0.86 +1.8 780,932 + +0.2 781,031 + +0.3 781,032 - +0.3 781,032 - +0.6 781,032 - -0.2 781,032 - -0.5 781,242 - EX28DRAFT_0783 0.31 -0.7 781,242 - EX28DRAFT_0783 0.31 -0.9 781,348 + EX28DRAFT_0783 0.45 -0.5 781,349 - EX28DRAFT_0783 0.45 -1.8 781,763 + -0.1 781,763 + +0.8 781,764 - -2.0 781,764 - +0.1 781,764 - -0.2 781,764 - -1.4
Or see this region's nucleotide sequence