Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0736 and EX28DRAFT_0737 are separated by 65 nucleotides EX28DRAFT_0737 and EX28DRAFT_0738 overlap by 4 nucleotides EX28DRAFT_0738 and EX28DRAFT_0739 are separated by 398 nucleotides EX28DRAFT_0739 and EX28DRAFT_0740 are separated by 54 nucleotides
EX28DRAFT_0736: EX28DRAFT_0736 - Cell division protein FtsI/penicillin-binding protein 2, at 732,795 to 734,513
_0736
EX28DRAFT_0737: EX28DRAFT_0737 - Methyltransferase domain, at 734,579 to 735,394
_0737
EX28DRAFT_0738: EX28DRAFT_0738 - Predicted membrane protein, at 735,391 to 735,957
_0738
EX28DRAFT_0739: EX28DRAFT_0739 - Predicted membrane protein, at 736,356 to 736,814
_0739
EX28DRAFT_0740: EX28DRAFT_0740 - PTS system, mannose/fructose/sorbose family, IID component, at 736,869 to 737,720
_0740
Position (kb) 735
736 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 734.391 kb on + strand at 734.392 kb on - strand at 734.523 kb on + strand at 734.525 kb on + strand at 734.544 kb on + strand at 734.626 kb on + strand at 734.627 kb on - strand at 734.634 kb on - strand at 734.635 kb on + strand at 734.636 kb on - strand at 734.636 kb on - strand at 734.705 kb on - strand, within EX28DRAFT_0737 at 734.778 kb on - strand, within EX28DRAFT_0737 at 734.871 kb on - strand, within EX28DRAFT_0737 at 734.871 kb on - strand, within EX28DRAFT_0737 at 734.873 kb on + strand, within EX28DRAFT_0737 at 734.873 kb on + strand, within EX28DRAFT_0737 at 735.158 kb on + strand, within EX28DRAFT_0737 at 735.159 kb on - strand, within EX28DRAFT_0737 at 735.334 kb on - strand at 735.334 kb on - strand at 735.342 kb on + strand at 735.343 kb on - strand at 735.343 kb on - strand at 735.497 kb on - strand, within EX28DRAFT_0738 at 735.734 kb on - strand, within EX28DRAFT_0738 at 735.864 kb on + strand, within EX28DRAFT_0738 at 735.984 kb on + strand at 735.985 kb on - strand at 736.022 kb on + strand at 736.026 kb on + strand at 736.027 kb on - strand at 736.027 kb on - strand at 736.053 kb on + strand at 736.054 kb on - strand at 736.054 kb on - strand at 736.169 kb on - strand at 736.532 kb on + strand, within EX28DRAFT_0739 at 736.593 kb on + strand, within EX28DRAFT_0739 at 736.593 kb on + strand, within EX28DRAFT_0739 at 736.611 kb on + strand, within EX28DRAFT_0739 at 736.639 kb on + strand, within EX28DRAFT_0739 at 736.649 kb on + strand, within EX28DRAFT_0739 at 736.753 kb on + strand, within EX28DRAFT_0739 at 736.794 kb on + strand at 736.858 kb on - strand at 736.870 kb on + strand at 736.870 kb on + strand at 736.871 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 734,391 + +1.7 734,392 - -0.1 734,523 + +0.3 734,525 + -0.1 734,544 + -0.1 734,626 + +0.6 734,627 - -0.7 734,634 - +0.3 734,635 + -0.4 734,636 - -0.8 734,636 - +0.3 734,705 - EX28DRAFT_0737 0.15 +0.7 734,778 - EX28DRAFT_0737 0.24 -0.6 734,871 - EX28DRAFT_0737 0.36 +0.2 734,871 - EX28DRAFT_0737 0.36 -0.4 734,873 + EX28DRAFT_0737 0.36 -0.3 734,873 + EX28DRAFT_0737 0.36 +1.1 735,158 + EX28DRAFT_0737 0.71 -0.7 735,159 - EX28DRAFT_0737 0.71 +3.2 735,334 - -1.7 735,334 - -0.6 735,342 + +0.8 735,343 - +0.5 735,343 - -0.0 735,497 - EX28DRAFT_0738 0.19 -1.3 735,734 - EX28DRAFT_0738 0.60 -3.5 735,864 + EX28DRAFT_0738 0.83 -3.0 735,984 + -1.9 735,985 - -2.2 736,022 + -1.8 736,026 + -1.6 736,027 - +0.8 736,027 - -0.2 736,053 + -0.9 736,054 - -0.7 736,054 - -3.6 736,169 - -0.1 736,532 + EX28DRAFT_0739 0.38 -0.3 736,593 + EX28DRAFT_0739 0.52 -0.4 736,593 + EX28DRAFT_0739 0.52 +0.9 736,611 + EX28DRAFT_0739 0.56 +0.2 736,639 + EX28DRAFT_0739 0.62 +3.1 736,649 + EX28DRAFT_0739 0.64 -0.8 736,753 + EX28DRAFT_0739 0.86 -1.0 736,794 + -0.2 736,858 - +0.0 736,870 + -0.7 736,870 + +0.0 736,871 - +0.9
Or see this region's nucleotide sequence