Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0724 and EX28DRAFT_0725 are separated by 96 nucleotides EX28DRAFT_0725 and EX28DRAFT_0726 are separated by 19 nucleotides EX28DRAFT_0726 and EX28DRAFT_0727 are separated by 193 nucleotides
EX28DRAFT_0724: EX28DRAFT_0724 - GAF domain-containing protein, at 722,873 to 723,370
_0724
EX28DRAFT_0725: EX28DRAFT_0725 - Activator of osmoprotectant transporter ProP, at 723,467 to 724,153
_0725
EX28DRAFT_0726: EX28DRAFT_0726 - C-terminal peptidase (prc), at 724,173 to 726,221
_0726
EX28DRAFT_0727: EX28DRAFT_0727 - Zn-dependent protease with chaperone function, at 726,415 to 727,296
_0727
Position (kb) 724
725
726
727 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 723.268 kb on + strand, within EX28DRAFT_0724 at 723.321 kb on + strand at 723.369 kb on - strand at 723.384 kb on + strand at 723.384 kb on + strand at 723.406 kb on + strand at 723.407 kb on - strand at 723.408 kb on + strand at 723.452 kb on + strand at 723.452 kb on + strand at 723.481 kb on + strand at 723.658 kb on + strand, within EX28DRAFT_0725 at 723.681 kb on - strand, within EX28DRAFT_0725 at 723.880 kb on + strand, within EX28DRAFT_0725 at 724.054 kb on + strand, within EX28DRAFT_0725 at 724.583 kb on + strand, within EX28DRAFT_0726 at 725.485 kb on - strand, within EX28DRAFT_0726 at 725.562 kb on + strand, within EX28DRAFT_0726 at 725.640 kb on + strand, within EX28DRAFT_0726 at 725.844 kb on + strand, within EX28DRAFT_0726 at 726.199 kb on + strand at 726.220 kb on - strand at 726.322 kb on + strand at 726.479 kb on + strand at 726.633 kb on + strand, within EX28DRAFT_0727 at 726.654 kb on + strand, within EX28DRAFT_0727 at 726.654 kb on + strand, within EX28DRAFT_0727 at 726.655 kb on - strand, within EX28DRAFT_0727 at 727.159 kb on + strand, within EX28DRAFT_0727 at 727.159 kb on + strand, within EX28DRAFT_0727 at 727.159 kb on + strand, within EX28DRAFT_0727 at 727.159 kb on + strand, within EX28DRAFT_0727
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 723,268 + EX28DRAFT_0724 0.79 +0.2 723,321 + +0.0 723,369 - -0.7 723,384 + -2.5 723,384 + -0.3 723,406 + +0.7 723,407 - -2.3 723,408 + -2.3 723,452 + -0.8 723,452 + +0.0 723,481 + -2.6 723,658 + EX28DRAFT_0725 0.28 -0.5 723,681 - EX28DRAFT_0725 0.31 -2.8 723,880 + EX28DRAFT_0725 0.60 -1.4 724,054 + EX28DRAFT_0725 0.85 -2.1 724,583 + EX28DRAFT_0726 0.20 -2.3 725,485 - EX28DRAFT_0726 0.64 -3.3 725,562 + EX28DRAFT_0726 0.68 -3.9 725,640 + EX28DRAFT_0726 0.72 -4.4 725,844 + EX28DRAFT_0726 0.82 -2.4 726,199 + -0.1 726,220 - +0.5 726,322 + -0.6 726,479 + -0.1 726,633 + EX28DRAFT_0727 0.25 -1.4 726,654 + EX28DRAFT_0727 0.27 -0.4 726,654 + EX28DRAFT_0727 0.27 -0.0 726,655 - EX28DRAFT_0727 0.27 -0.6 727,159 + EX28DRAFT_0727 0.84 -0.1 727,159 + EX28DRAFT_0727 0.84 -0.7 727,159 + EX28DRAFT_0727 0.84 -0.0 727,159 + EX28DRAFT_0727 0.84 -1.2
Or see this region's nucleotide sequence