Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0697 and EX28DRAFT_0698 overlap by 4 nucleotides EX28DRAFT_0698 and EX28DRAFT_0699 are separated by 62 nucleotides EX28DRAFT_0699 and EX28DRAFT_0700 are separated by 15 nucleotides
EX28DRAFT_0697: EX28DRAFT_0697 - ABC-type Mn2+/Zn2+ transport systems, permease components, at 694,056 to 694,841
_0697
EX28DRAFT_0698: EX28DRAFT_0698 - ABC-type Mn/Zn transport systems, ATPase component, at 694,838 to 695,593
_0698
EX28DRAFT_0699: EX28DRAFT_0699 - ABC-type Zn2+ transport system, periplasmic component/surface adhesin, at 695,656 to 696,615
_0699
EX28DRAFT_0700: EX28DRAFT_0700 - Membrane proteins related to metalloendopeptidases, at 696,631 to 697,950
_0700
Position (kb) 695
696
697 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 694.670 kb on - strand, within EX28DRAFT_0697 at 694.803 kb on - strand at 694.803 kb on - strand at 694.912 kb on - strand at 694.912 kb on - strand at 694.955 kb on - strand, within EX28DRAFT_0698 at 695.003 kb on - strand, within EX28DRAFT_0698 at 695.003 kb on - strand, within EX28DRAFT_0698 at 695.042 kb on + strand, within EX28DRAFT_0698 at 695.096 kb on + strand, within EX28DRAFT_0698 at 695.096 kb on + strand, within EX28DRAFT_0698 at 695.096 kb on + strand, within EX28DRAFT_0698 at 695.116 kb on - strand, within EX28DRAFT_0698 at 695.204 kb on + strand, within EX28DRAFT_0698 at 695.204 kb on + strand, within EX28DRAFT_0698 at 695.204 kb on + strand, within EX28DRAFT_0698 at 695.204 kb on + strand, within EX28DRAFT_0698 at 695.410 kb on + strand, within EX28DRAFT_0698 at 695.628 kb on + strand at 695.629 kb on - strand at 695.629 kb on - strand at 695.675 kb on + strand at 695.724 kb on + strand at 695.900 kb on + strand, within EX28DRAFT_0699 at 695.900 kb on + strand, within EX28DRAFT_0699 at 696.101 kb on - strand, within EX28DRAFT_0699 at 696.101 kb on - strand, within EX28DRAFT_0699 at 696.131 kb on + strand, within EX28DRAFT_0699 at 696.200 kb on + strand, within EX28DRAFT_0699 at 696.233 kb on + strand, within EX28DRAFT_0699 at 696.283 kb on - strand, within EX28DRAFT_0699 at 696.557 kb on - strand at 696.628 kb on + strand at 696.629 kb on - strand at 696.666 kb on + strand at 696.746 kb on - strand at 696.752 kb on - strand at 696.922 kb on + strand, within EX28DRAFT_0700 at 696.922 kb on + strand, within EX28DRAFT_0700 at 696.922 kb on + strand, within EX28DRAFT_0700 at 696.923 kb on - strand, within EX28DRAFT_0700 at 696.985 kb on - strand, within EX28DRAFT_0700
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 694,670 - EX28DRAFT_0697 0.78 -0.9 694,803 - +0.4 694,803 - -0.3 694,912 - -0.8 694,912 - +0.4 694,955 - EX28DRAFT_0698 0.15 -0.3 695,003 - EX28DRAFT_0698 0.22 -0.0 695,003 - EX28DRAFT_0698 0.22 +0.7 695,042 + EX28DRAFT_0698 0.27 +0.5 695,096 + EX28DRAFT_0698 0.34 -2.0 695,096 + EX28DRAFT_0698 0.34 -0.4 695,096 + EX28DRAFT_0698 0.34 -0.6 695,116 - EX28DRAFT_0698 0.37 -1.0 695,204 + EX28DRAFT_0698 0.48 -0.3 695,204 + EX28DRAFT_0698 0.48 -0.4 695,204 + EX28DRAFT_0698 0.48 +0.1 695,204 + EX28DRAFT_0698 0.48 -0.2 695,410 + EX28DRAFT_0698 0.76 -0.1 695,628 + +0.3 695,629 - +0.2 695,629 - -0.4 695,675 + +1.6 695,724 + +0.7 695,900 + EX28DRAFT_0699 0.25 -0.7 695,900 + EX28DRAFT_0699 0.25 +0.6 696,101 - EX28DRAFT_0699 0.46 -0.9 696,101 - EX28DRAFT_0699 0.46 -2.1 696,131 + EX28DRAFT_0699 0.49 +0.8 696,200 + EX28DRAFT_0699 0.57 +0.1 696,233 + EX28DRAFT_0699 0.60 -2.8 696,283 - EX28DRAFT_0699 0.65 +0.2 696,557 - +0.9 696,628 + +2.1 696,629 - -0.6 696,666 + +1.1 696,746 - +0.1 696,752 - +0.4 696,922 + EX28DRAFT_0700 0.22 +0.2 696,922 + EX28DRAFT_0700 0.22 -0.4 696,922 + EX28DRAFT_0700 0.22 +0.2 696,923 - EX28DRAFT_0700 0.22 +0.2 696,985 - EX28DRAFT_0700 0.27 -0.6
Or see this region's nucleotide sequence