Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0645 and EX28DRAFT_0646 are separated by 228 nucleotides EX28DRAFT_0646 and EX28DRAFT_0647 are separated by 36 nucleotides EX28DRAFT_0647 and EX28DRAFT_0648 are separated by 202 nucleotides EX28DRAFT_0648 and EX28DRAFT_0649 are separated by 425 nucleotides
EX28DRAFT_0645: EX28DRAFT_0645 - aromatic amino acid transport protein, at 639,157 to 640,368
_0645
EX28DRAFT_0646: EX28DRAFT_0646 - hypothetical protein, at 640,597 to 640,938
_0646
EX28DRAFT_0647: EX28DRAFT_0647 - Ferritin-like protein, at 640,975 to 641,472
_0647
EX28DRAFT_0648: EX28DRAFT_0648 - YecR-like lipoprotein, at 641,675 to 642,013
_0648
EX28DRAFT_0649: EX28DRAFT_0649 - Protein of unknown function (DUF2766), at 642,439 to 642,690
_0649
Position (kb) 640
641
642 Strain fitness (log2 ratio) -2
-1
0
1 at 640.076 kb on + strand, within EX28DRAFT_0645 at 640.094 kb on + strand, within EX28DRAFT_0645 at 640.114 kb on - strand, within EX28DRAFT_0645 at 640.149 kb on - strand, within EX28DRAFT_0645 at 640.149 kb on - strand, within EX28DRAFT_0645 at 640.197 kb on - strand, within EX28DRAFT_0645 at 640.223 kb on + strand, within EX28DRAFT_0645 at 640.470 kb on - strand at 640.514 kb on + strand at 640.515 kb on - strand at 640.830 kb on + strand, within EX28DRAFT_0646 at 640.831 kb on - strand, within EX28DRAFT_0646 at 640.937 kb on - strand at 640.976 kb on + strand at 641.007 kb on + strand at 641.290 kb on - strand, within EX28DRAFT_0647 at 641.375 kb on + strand, within EX28DRAFT_0647 at 641.532 kb on - strand at 641.562 kb on + strand at 641.719 kb on + strand, within EX28DRAFT_0648 at 641.725 kb on + strand, within EX28DRAFT_0648 at 641.725 kb on + strand, within EX28DRAFT_0648 at 641.725 kb on + strand, within EX28DRAFT_0648 at 641.725 kb on + strand, within EX28DRAFT_0648 at 641.728 kb on - strand, within EX28DRAFT_0648 at 641.818 kb on - strand, within EX28DRAFT_0648 at 641.858 kb on + strand, within EX28DRAFT_0648 at 641.858 kb on + strand, within EX28DRAFT_0648 at 641.859 kb on - strand, within EX28DRAFT_0648 at 641.859 kb on - strand, within EX28DRAFT_0648 at 641.859 kb on - strand, within EX28DRAFT_0648 at 641.862 kb on + strand, within EX28DRAFT_0648 at 641.862 kb on + strand, within EX28DRAFT_0648 at 641.863 kb on - strand, within EX28DRAFT_0648 at 641.863 kb on - strand, within EX28DRAFT_0648 at 641.863 kb on - strand, within EX28DRAFT_0648 at 641.874 kb on + strand, within EX28DRAFT_0648 at 641.962 kb on + strand, within EX28DRAFT_0648 at 641.962 kb on + strand, within EX28DRAFT_0648 at 641.966 kb on - strand, within EX28DRAFT_0648 at 641.966 kb on - strand, within EX28DRAFT_0648 at 642.037 kb on + strand at 642.409 kb on + strand at 642.410 kb on - strand at 642.422 kb on - strand at 642.426 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 640,076 + EX28DRAFT_0645 0.76 -1.6 640,094 + EX28DRAFT_0645 0.77 +0.2 640,114 - EX28DRAFT_0645 0.79 +0.2 640,149 - EX28DRAFT_0645 0.82 -0.5 640,149 - EX28DRAFT_0645 0.82 +0.3 640,197 - EX28DRAFT_0645 0.86 -0.1 640,223 + EX28DRAFT_0645 0.88 +1.1 640,470 - -0.3 640,514 + -0.9 640,515 - +0.4 640,830 + EX28DRAFT_0646 0.68 -0.1 640,831 - EX28DRAFT_0646 0.68 -0.9 640,937 - -0.1 640,976 + -0.6 641,007 + -0.4 641,290 - EX28DRAFT_0647 0.63 -2.3 641,375 + EX28DRAFT_0647 0.80 +0.0 641,532 - -0.1 641,562 + -0.5 641,719 + EX28DRAFT_0648 0.13 -1.0 641,725 + EX28DRAFT_0648 0.15 +0.2 641,725 + EX28DRAFT_0648 0.15 +0.4 641,725 + EX28DRAFT_0648 0.15 +0.5 641,725 + EX28DRAFT_0648 0.15 +0.4 641,728 - EX28DRAFT_0648 0.16 -0.0 641,818 - EX28DRAFT_0648 0.42 -0.0 641,858 + EX28DRAFT_0648 0.54 +0.2 641,858 + EX28DRAFT_0648 0.54 -0.3 641,859 - EX28DRAFT_0648 0.54 -0.0 641,859 - EX28DRAFT_0648 0.54 -1.3 641,859 - EX28DRAFT_0648 0.54 +0.3 641,862 + EX28DRAFT_0648 0.55 +0.8 641,862 + EX28DRAFT_0648 0.55 -0.1 641,863 - EX28DRAFT_0648 0.55 -2.7 641,863 - EX28DRAFT_0648 0.55 +0.5 641,863 - EX28DRAFT_0648 0.55 -0.8 641,874 + EX28DRAFT_0648 0.59 -0.2 641,962 + EX28DRAFT_0648 0.85 -0.0 641,962 + EX28DRAFT_0648 0.85 -0.1 641,966 - EX28DRAFT_0648 0.86 -0.2 641,966 - EX28DRAFT_0648 0.86 +0.2 642,037 + -1.8 642,409 + +0.3 642,410 - -0.2 642,422 - -0.4 642,426 - +0.0
Or see this region's nucleotide sequence