Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0619 and EX28DRAFT_0620 are separated by 48 nucleotides EX28DRAFT_0620 and EX28DRAFT_0621 are separated by 5 nucleotides EX28DRAFT_0621 and EX28DRAFT_0622 are separated by 21 nucleotides
EX28DRAFT_0619: EX28DRAFT_0619 - Glycosidases, at 616,566 to 618,056
_0619
EX28DRAFT_0620: EX28DRAFT_0620 - Flagellar protein FliT, at 618,105 to 618,479
_0620
EX28DRAFT_0621: EX28DRAFT_0621 - flagellar biosynthetic protein FliS, at 618,485 to 618,889
_0621
EX28DRAFT_0622: EX28DRAFT_0622 - Flagellar capping protein, at 618,911 to 620,335
_0622
Position (kb) 618
619 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 617.137 kb on + strand, within EX28DRAFT_0619 at 617.224 kb on + strand, within EX28DRAFT_0619 at 617.224 kb on + strand, within EX28DRAFT_0619 at 617.224 kb on + strand, within EX28DRAFT_0619 at 617.225 kb on - strand, within EX28DRAFT_0619 at 617.225 kb on - strand, within EX28DRAFT_0619 at 617.238 kb on - strand, within EX28DRAFT_0619 at 617.271 kb on - strand, within EX28DRAFT_0619 at 617.401 kb on + strand, within EX28DRAFT_0619 at 617.402 kb on - strand, within EX28DRAFT_0619 at 617.459 kb on - strand, within EX28DRAFT_0619 at 617.459 kb on - strand, within EX28DRAFT_0619 at 617.468 kb on + strand, within EX28DRAFT_0619 at 617.469 kb on - strand, within EX28DRAFT_0619 at 617.794 kb on - strand, within EX28DRAFT_0619 at 617.794 kb on - strand, within EX28DRAFT_0619 at 617.794 kb on - strand, within EX28DRAFT_0619 at 617.878 kb on + strand, within EX28DRAFT_0619 at 617.918 kb on + strand at 618.016 kb on + strand at 618.016 kb on + strand at 618.017 kb on - strand at 618.033 kb on + strand at 618.034 kb on - strand at 618.034 kb on - strand at 618.091 kb on + strand at 618.109 kb on - strand at 618.146 kb on + strand, within EX28DRAFT_0620 at 618.171 kb on - strand, within EX28DRAFT_0620 at 618.362 kb on - strand, within EX28DRAFT_0620 at 618.473 kb on + strand at 618.548 kb on + strand, within EX28DRAFT_0621 at 618.575 kb on + strand, within EX28DRAFT_0621 at 618.617 kb on - strand, within EX28DRAFT_0621 at 618.618 kb on + strand, within EX28DRAFT_0621 at 618.780 kb on + strand, within EX28DRAFT_0621 at 618.782 kb on - strand, within EX28DRAFT_0621 at 618.845 kb on + strand, within EX28DRAFT_0621 at 618.851 kb on + strand at 618.883 kb on + strand at 618.884 kb on - strand at 618.884 kb on - strand at 618.886 kb on - strand at 618.886 kb on - strand at 618.886 kb on - strand at 618.886 kb on - strand at 618.886 kb on - strand at 618.890 kb on - strand at 618.907 kb on - strand at 618.907 kb on - strand at 618.940 kb on - strand at 618.968 kb on + strand at 618.971 kb on + strand at 619.041 kb on + strand at 619.449 kb on + strand, within EX28DRAFT_0622 at 619.450 kb on - strand, within EX28DRAFT_0622 at 619.450 kb on - strand, within EX28DRAFT_0622 at 619.450 kb on - strand, within EX28DRAFT_0622 at 619.450 kb on - strand, within EX28DRAFT_0622
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 617,137 + EX28DRAFT_0619 0.38 +0.4 617,224 + EX28DRAFT_0619 0.44 -0.1 617,224 + EX28DRAFT_0619 0.44 -0.7 617,224 + EX28DRAFT_0619 0.44 -0.6 617,225 - EX28DRAFT_0619 0.44 -1.9 617,225 - EX28DRAFT_0619 0.44 -0.2 617,238 - EX28DRAFT_0619 0.45 -0.1 617,271 - EX28DRAFT_0619 0.47 -0.4 617,401 + EX28DRAFT_0619 0.56 +1.1 617,402 - EX28DRAFT_0619 0.56 -0.2 617,459 - EX28DRAFT_0619 0.60 +0.0 617,459 - EX28DRAFT_0619 0.60 -0.7 617,468 + EX28DRAFT_0619 0.60 -0.3 617,469 - EX28DRAFT_0619 0.61 +0.5 617,794 - EX28DRAFT_0619 0.82 +1.1 617,794 - EX28DRAFT_0619 0.82 +0.0 617,794 - EX28DRAFT_0619 0.82 +0.4 617,878 + EX28DRAFT_0619 0.88 +0.9 617,918 + -0.2 618,016 + +0.5 618,016 + -0.4 618,017 - +0.6 618,033 + -0.9 618,034 - -0.2 618,034 - -0.1 618,091 + -0.4 618,109 - +0.4 618,146 + EX28DRAFT_0620 0.11 +0.7 618,171 - EX28DRAFT_0620 0.18 +2.1 618,362 - EX28DRAFT_0620 0.69 -0.1 618,473 + -0.7 618,548 + EX28DRAFT_0621 0.16 -0.1 618,575 + EX28DRAFT_0621 0.22 -0.4 618,617 - EX28DRAFT_0621 0.33 -0.6 618,618 + EX28DRAFT_0621 0.33 -3.9 618,780 + EX28DRAFT_0621 0.73 +1.0 618,782 - EX28DRAFT_0621 0.73 +1.1 618,845 + EX28DRAFT_0621 0.89 -0.7 618,851 + +0.1 618,883 + +0.2 618,884 - +0.6 618,884 - +0.3 618,886 - +0.0 618,886 - +0.2 618,886 - +0.2 618,886 - +1.4 618,886 - +0.8 618,890 - +0.5 618,907 - +0.8 618,907 - -0.2 618,940 - +0.1 618,968 + +0.3 618,971 + +0.4 619,041 + -0.3 619,449 + EX28DRAFT_0622 0.38 +0.9 619,450 - EX28DRAFT_0622 0.38 +1.2 619,450 - EX28DRAFT_0622 0.38 +1.0 619,450 - EX28DRAFT_0622 0.38 +2.3 619,450 - EX28DRAFT_0622 0.38 +0.2
Or see this region's nucleotide sequence