Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0574 and EX28DRAFT_0575 overlap by 4 nucleotides EX28DRAFT_0575 and EX28DRAFT_0576 overlap by 1 nucleotides EX28DRAFT_0576 and EX28DRAFT_0577 are separated by 138 nucleotides
EX28DRAFT_0574: EX28DRAFT_0574 - Siderophore synthetase component, at 571,216 to 572,958
_0574
EX28DRAFT_0575: EX28DRAFT_0575 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 572,955 to 573,902
_0575
EX28DRAFT_0576: EX28DRAFT_0576 - Siderophore synthetase component, at 573,902 to 575,644
_0576
EX28DRAFT_0577: EX28DRAFT_0577 - Arabinose efflux permease, at 575,783 to 576,994
_0577
Position (kb) 573
574
575
576 Strain fitness (log2 ratio) -2
-1
0
1 at 573.133 kb on + strand, within EX28DRAFT_0575 at 573.172 kb on + strand, within EX28DRAFT_0575 at 573.287 kb on - strand, within EX28DRAFT_0575 at 573.332 kb on - strand, within EX28DRAFT_0575 at 573.332 kb on - strand, within EX28DRAFT_0575 at 573.359 kb on - strand, within EX28DRAFT_0575 at 573.500 kb on - strand, within EX28DRAFT_0575 at 573.646 kb on + strand, within EX28DRAFT_0575 at 573.717 kb on - strand, within EX28DRAFT_0575 at 573.943 kb on - strand at 574.039 kb on - strand at 574.039 kb on - strand at 574.180 kb on - strand, within EX28DRAFT_0576 at 574.183 kb on - strand, within EX28DRAFT_0576 at 574.343 kb on - strand, within EX28DRAFT_0576 at 574.375 kb on - strand, within EX28DRAFT_0576 at 574.406 kb on + strand, within EX28DRAFT_0576 at 574.407 kb on - strand, within EX28DRAFT_0576 at 574.457 kb on + strand, within EX28DRAFT_0576 at 574.545 kb on - strand, within EX28DRAFT_0576 at 574.801 kb on + strand, within EX28DRAFT_0576 at 574.801 kb on + strand, within EX28DRAFT_0576 at 574.801 kb on + strand, within EX28DRAFT_0576 at 574.828 kb on - strand, within EX28DRAFT_0576 at 575.472 kb on + strand at 575.644 kb on + strand at 575.644 kb on + strand at 575.645 kb on - strand at 575.645 kb on - strand at 575.651 kb on - strand at 575.651 kb on - strand at 575.723 kb on + strand at 575.768 kb on + strand at 575.768 kb on + strand at 575.768 kb on + strand at 575.769 kb on - strand at 575.769 kb on - strand at 575.769 kb on - strand at 575.847 kb on + strand at 575.848 kb on - strand at 575.860 kb on - strand at 575.863 kb on - strand at 576.019 kb on + strand, within EX28DRAFT_0577 at 576.019 kb on + strand, within EX28DRAFT_0577 at 576.020 kb on - strand, within EX28DRAFT_0577 at 576.116 kb on + strand, within EX28DRAFT_0577 at 576.117 kb on - strand, within EX28DRAFT_0577
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 573,133 + EX28DRAFT_0575 0.19 -0.0 573,172 + EX28DRAFT_0575 0.23 +0.5 573,287 - EX28DRAFT_0575 0.35 -2.0 573,332 - EX28DRAFT_0575 0.40 -0.0 573,332 - EX28DRAFT_0575 0.40 +0.0 573,359 - EX28DRAFT_0575 0.43 -1.2 573,500 - EX28DRAFT_0575 0.57 -0.8 573,646 + EX28DRAFT_0575 0.73 +0.1 573,717 - EX28DRAFT_0575 0.80 +0.0 573,943 - -0.3 574,039 - +0.1 574,039 - +0.3 574,180 - EX28DRAFT_0576 0.16 -0.4 574,183 - EX28DRAFT_0576 0.16 -0.2 574,343 - EX28DRAFT_0576 0.25 +0.3 574,375 - EX28DRAFT_0576 0.27 -0.5 574,406 + EX28DRAFT_0576 0.29 -0.7 574,407 - EX28DRAFT_0576 0.29 -0.3 574,457 + EX28DRAFT_0576 0.32 -1.5 574,545 - EX28DRAFT_0576 0.37 -0.2 574,801 + EX28DRAFT_0576 0.52 +0.4 574,801 + EX28DRAFT_0576 0.52 -0.2 574,801 + EX28DRAFT_0576 0.52 -0.1 574,828 - EX28DRAFT_0576 0.53 -0.3 575,472 + +0.3 575,644 + +0.6 575,644 + -0.8 575,645 - +0.1 575,645 - -0.2 575,651 - -0.7 575,651 - +0.0 575,723 + +1.4 575,768 + -1.1 575,768 + +0.7 575,768 + +0.0 575,769 - -0.1 575,769 - -0.2 575,769 - -1.6 575,847 + -0.5 575,848 - -1.5 575,860 - -1.5 575,863 - -0.7 576,019 + EX28DRAFT_0577 0.19 +0.5 576,019 + EX28DRAFT_0577 0.19 -0.2 576,020 - EX28DRAFT_0577 0.20 -0.3 576,116 + EX28DRAFT_0577 0.27 -0.2 576,117 - EX28DRAFT_0577 0.28 +0.5
Or see this region's nucleotide sequence