Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0289 and EX28DRAFT_0290 overlap by 11 nucleotides EX28DRAFT_0290 and EX28DRAFT_0291 are separated by 229 nucleotides EX28DRAFT_0291 and EX28DRAFT_0292 are separated by 33 nucleotides
EX28DRAFT_0289: EX28DRAFT_0289 - folylpolyglutamate synthase/dihydrofolate synthase, at 251,611 to 252,879
_0289
EX28DRAFT_0290: EX28DRAFT_0290 - Uncharacterized protein conserved in bacteria, at 252,869 to 253,561
_0290
EX28DRAFT_0291: EX28DRAFT_0291 - Uncharacterized membrane protein, required for colicin V production, at 253,791 to 254,279
_0291
EX28DRAFT_0292: EX28DRAFT_0292 - amidophosphoribosyltransferase (EC 2.4.2.14), at 254,313 to 255,830
_0292
Position (kb) 253
254
255 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 252.931 kb on + strand at 252.931 kb on + strand at 252.988 kb on + strand, within EX28DRAFT_0290 at 253.328 kb on + strand, within EX28DRAFT_0290 at 253.329 kb on - strand, within EX28DRAFT_0290 at 253.363 kb on + strand, within EX28DRAFT_0290 at 253.413 kb on - strand, within EX28DRAFT_0290 at 253.490 kb on - strand, within EX28DRAFT_0290 at 253.570 kb on + strand at 253.697 kb on + strand at 253.742 kb on + strand at 253.924 kb on - strand, within EX28DRAFT_0291 at 253.929 kb on + strand, within EX28DRAFT_0291 at 253.930 kb on - strand, within EX28DRAFT_0291 at 254.034 kb on + strand, within EX28DRAFT_0291 at 254.219 kb on + strand, within EX28DRAFT_0291 at 254.468 kb on - strand, within EX28DRAFT_0292 at 254.926 kb on - strand, within EX28DRAFT_0292 at 254.927 kb on + strand, within EX28DRAFT_0292 at 255.088 kb on - strand, within EX28DRAFT_0292
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 252,931 + -0.6 252,931 + -1.0 252,988 + EX28DRAFT_0290 0.17 +0.1 253,328 + EX28DRAFT_0290 0.66 +0.5 253,329 - EX28DRAFT_0290 0.66 +0.7 253,363 + EX28DRAFT_0290 0.71 +0.7 253,413 - EX28DRAFT_0290 0.78 +0.3 253,490 - EX28DRAFT_0290 0.90 -1.5 253,570 + +1.3 253,697 + -0.4 253,742 + -3.0 253,924 - EX28DRAFT_0291 0.27 -2.7 253,929 + EX28DRAFT_0291 0.28 -0.5 253,930 - EX28DRAFT_0291 0.28 -1.2 254,034 + EX28DRAFT_0291 0.50 -4.4 254,219 + EX28DRAFT_0291 0.88 +0.4 254,468 - EX28DRAFT_0292 0.10 +2.0 254,926 - EX28DRAFT_0292 0.40 -0.0 254,927 + EX28DRAFT_0292 0.40 -0.6 255,088 - EX28DRAFT_0292 0.51 +2.0
Or see this region's nucleotide sequence