Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0035 and EX28DRAFT_0036 are separated by 57 nucleotides EX28DRAFT_0036 and EX28DRAFT_0037 are separated by 0 nucleotides EX28DRAFT_0037 and EX28DRAFT_0038 are separated by 146 nucleotides EX28DRAFT_0038 and EX28DRAFT_0039 are separated by 22 nucleotides
EX28DRAFT_0035: EX28DRAFT_0035 - Zn(II)-responsive transcriptional regulator, at 16,397 to 16,822
_0035
EX28DRAFT_0036: EX28DRAFT_0036 - Uncharacterized protein conserved in bacteria, at 16,880 to 17,095
_0036
EX28DRAFT_0037: EX28DRAFT_0037 - large conductance mechanosensitive channel protein, at 17,096 to 17,506
_0037
EX28DRAFT_0038: EX28DRAFT_0038 - K+ transport systems, NAD-binding component, at 17,653 to 19,029
_0038
EX28DRAFT_0039: EX28DRAFT_0039 - 16S rRNA (cytosine(967)-C(5))-methyltransferase, at 19,052 to 20,314
_0039
Position (kb) 17
18
19
20 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 16.684 kb on + strand, within EX28DRAFT_0035 at 16.685 kb on - strand, within EX28DRAFT_0035 at 16.687 kb on - strand, within EX28DRAFT_0035 at 16.828 kb on - strand at 16.880 kb on - strand at 16.912 kb on + strand, within EX28DRAFT_0036 at 16.935 kb on + strand, within EX28DRAFT_0036 at 16.935 kb on + strand, within EX28DRAFT_0036 at 17.026 kb on + strand, within EX28DRAFT_0036 at 17.061 kb on + strand, within EX28DRAFT_0036 at 17.086 kb on + strand at 17.086 kb on + strand at 17.087 kb on - strand at 17.091 kb on - strand at 17.228 kb on - strand, within EX28DRAFT_0037 at 17.228 kb on - strand, within EX28DRAFT_0037 at 17.228 kb on - strand, within EX28DRAFT_0037 at 17.262 kb on - strand, within EX28DRAFT_0037 at 17.291 kb on + strand, within EX28DRAFT_0037 at 17.291 kb on + strand, within EX28DRAFT_0037 at 17.294 kb on + strand, within EX28DRAFT_0037 at 17.295 kb on - strand, within EX28DRAFT_0037 at 17.386 kb on + strand, within EX28DRAFT_0037 at 17.728 kb on + strand at 18.097 kb on - strand, within EX28DRAFT_0038 at 18.333 kb on + strand, within EX28DRAFT_0038 at 18.630 kb on - strand, within EX28DRAFT_0038 at 19.227 kb on + strand, within EX28DRAFT_0039 at 19.228 kb on - strand, within EX28DRAFT_0039 at 19.303 kb on + strand, within EX28DRAFT_0039 at 19.306 kb on + strand, within EX28DRAFT_0039 at 19.307 kb on - strand, within EX28DRAFT_0039 at 19.553 kb on - strand, within EX28DRAFT_0039 at 19.653 kb on - strand, within EX28DRAFT_0039 at 19.691 kb on + strand, within EX28DRAFT_0039 at 19.715 kb on + strand, within EX28DRAFT_0039
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 16,684 + EX28DRAFT_0035 0.67 +0.2 16,685 - EX28DRAFT_0035 0.68 -0.4 16,687 - EX28DRAFT_0035 0.68 +1.0 16,828 - -1.1 16,880 - -3.6 16,912 + EX28DRAFT_0036 0.15 +0.1 16,935 + EX28DRAFT_0036 0.25 +0.1 16,935 + EX28DRAFT_0036 0.25 -0.5 17,026 + EX28DRAFT_0036 0.68 -0.7 17,061 + EX28DRAFT_0036 0.84 -0.5 17,086 + -0.8 17,086 + +0.3 17,087 - -0.1 17,091 - +0.1 17,228 - EX28DRAFT_0037 0.32 +0.2 17,228 - EX28DRAFT_0037 0.32 +1.2 17,228 - EX28DRAFT_0037 0.32 -0.2 17,262 - EX28DRAFT_0037 0.40 +0.1 17,291 + EX28DRAFT_0037 0.47 -0.0 17,291 + EX28DRAFT_0037 0.47 +0.1 17,294 + EX28DRAFT_0037 0.48 -0.4 17,295 - EX28DRAFT_0037 0.48 +2.1 17,386 + EX28DRAFT_0037 0.71 -0.2 17,728 + -2.4 18,097 - EX28DRAFT_0038 0.32 -1.2 18,333 + EX28DRAFT_0038 0.49 -2.1 18,630 - EX28DRAFT_0038 0.71 -1.9 19,227 + EX28DRAFT_0039 0.14 -1.8 19,228 - EX28DRAFT_0039 0.14 -1.6 19,303 + EX28DRAFT_0039 0.20 -1.6 19,306 + EX28DRAFT_0039 0.20 -0.8 19,307 - EX28DRAFT_0039 0.20 -0.6 19,553 - EX28DRAFT_0039 0.40 -1.2 19,653 - EX28DRAFT_0039 0.48 -0.9 19,691 + EX28DRAFT_0039 0.51 -4.2 19,715 + EX28DRAFT_0039 0.52 -1.7
Or see this region's nucleotide sequence