Strain Fitness in Bosea sp. OAE506 around ABIE41_RS13550

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
2,778,675	-		ABIE41_RS13540	0.64	+0.5
2,778,770	+		ABIE41_RS13540	0.75	-1.8
2,778,771	-		ABIE41_RS13540	0.75	-1.4
2,778,771	-		ABIE41_RS13540	0.75	+0.4
2,778,997	+				+0.6
2,778,997	+				-1.8
2,778,998	-				+1.2
2,779,097	+		ABIE41_RS13545	0.23	+0.3
2,779,097	+		ABIE41_RS13545	0.23	-0.7
2,779,097	+		ABIE41_RS13545	0.23	-0.3
2,779,098	-		ABIE41_RS13545	0.24	+0.1
2,779,098	-		ABIE41_RS13545	0.24	+1.0
2,779,098	-		ABIE41_RS13545	0.24	-0.5
2,779,098	-		ABIE41_RS13545	0.24	-0.1
2,779,098	-		ABIE41_RS13545	0.24	+0.4
2,779,098	-		ABIE41_RS13545	0.24	-0.5
2,779,099	+		ABIE41_RS13545	0.24	+0.4
2,779,099	+		ABIE41_RS13545	0.24	+0.4
2,779,099	+		ABIE41_RS13545	0.24	-0.1
2,779,100	-		ABIE41_RS13545	0.24	-0.7
2,779,501	-				+0.2
2,779,518	+				-1.3
2,779,519	-				-0.4
2,779,652	-				+1.2
2,779,740	+				-0.4
2,779,741	-				-0.4
2,779,785	+				+1.2
2,779,786	-				-0.3
2,779,947	-		ABIE41_RS13550	0.12	-0.3
2,779,947	-		ABIE41_RS13550	0.12	-0.4
2,779,947	-		ABIE41_RS13550	0.12	+0.5
2,779,947	-		ABIE41_RS13550	0.12	+0.8
2,779,968	+		ABIE41_RS13550	0.13	+0.1
2,779,968	+		ABIE41_RS13550	0.13	-0.1
2,779,968	+		ABIE41_RS13550	0.13	+2.4
2,779,968	+		ABIE41_RS13550	0.13	-0.0
2,779,969	-		ABIE41_RS13550	0.13	-1.5
2,779,969	-		ABIE41_RS13550	0.13	-2.0
2,780,202	+		ABIE41_RS13550	0.21	+0.7
2,780,202	+		ABIE41_RS13550	0.21	-1.0
2,780,265	+		ABIE41_RS13550	0.24	-0.5
2,780,265	+		ABIE41_RS13550	0.24	+1.1
2,780,356	-		ABIE41_RS13550	0.27	+0.3
2,780,491	-		ABIE41_RS13550	0.32	+0.8
2,780,550	+		ABIE41_RS13550	0.34	-0.7
2,780,550	+		ABIE41_RS13550	0.34	+0.5
2,780,550	+		ABIE41_RS13550	0.34	-2.6
2,780,550	+		ABIE41_RS13550	0.34	+0.3
2,780,550	+		ABIE41_RS13550	0.34	-1.3
2,780,551	-		ABIE41_RS13550	0.34	-1.8
2,780,551	-		ABIE41_RS13550	0.34	+0.7
2,780,620	-		ABIE41_RS13550	0.36	+2.0
2,781,033	+		ABIE41_RS13550	0.51	-2.1
2,781,033	+		ABIE41_RS13550	0.51	+0.9
2,781,033	+		ABIE41_RS13550	0.51	-0.1
2,781,034	-		ABIE41_RS13550	0.51	+0.7
2,781,034	-		ABIE41_RS13550	0.51	+0.1
2,781,049	-		ABIE41_RS13550	0.52	-1.6
2,781,078	+		ABIE41_RS13550	0.53	-0.2
2,781,078	+		ABIE41_RS13550	0.53	-0.8
2,781,084	+		ABIE41_RS13550	0.53	+1.4
2,781,084	+		ABIE41_RS13550	0.53	+1.4
2,781,084	+		ABIE41_RS13550	0.53	+1.1
2,781,085	-		ABIE41_RS13550	0.53	-0.4
2,781,085	-		ABIE41_RS13550	0.53	+0.6
2,781,085	-		ABIE41_RS13550	0.53	-0.1
2,781,420	+		ABIE41_RS13550	0.65	+0.3
2,781,420	+		ABIE41_RS13550	0.65	+0.0
2,781,420	+		ABIE41_RS13550	0.65	-0.4
2,781,420	+		ABIE41_RS13550	0.65	+0.1
2,781,420	+		ABIE41_RS13550	0.65	-0.2
2,781,421	-		ABIE41_RS13550	0.65	+0.0
2,781,421	-		ABIE41_RS13550	0.65	+2.1
2,781,421	-		ABIE41_RS13550	0.65	-0.9
2,781,421	-		ABIE41_RS13550	0.65	-0.7
2,781,421	-		ABIE41_RS13550	0.65	+0.3
2,781,421	-		ABIE41_RS13550	0.65	-0.2
2,781,421	-		ABIE41_RS13550	0.65	+1.0
2,781,421	-		ABIE41_RS13550	0.65	-2.0
2,781,657	+		ABIE41_RS13550	0.74	-0.3
2,781,657	+		ABIE41_RS13550	0.74	+0.5
2,781,658	-		ABIE41_RS13550	0.74	+0.4
2,781,658	-		ABIE41_RS13550	0.74	+0.7
2,781,884	+		ABIE41_RS13550	0.82	-0.0
2,781,894	+		ABIE41_RS13550	0.83	-0.7
2,781,895	-		ABIE41_RS13550	0.83	-0.2
2,781,895	-		ABIE41_RS13550	0.83	-0.4
2,781,895	-		ABIE41_RS13550	0.83	-0.6
2,781,895	-		ABIE41_RS13550	0.83	+1.0
2,781,895	-		ABIE41_RS13550	0.83	-2.2
2,781,916	+		ABIE41_RS13550	0.83	-1.4
2,781,916	+		ABIE41_RS13550	0.83	-0.0
2,781,917	-		ABIE41_RS13550	0.83	-0.2
2,781,917	-		ABIE41_RS13550	0.83	-1.6
2,782,062	-		ABIE41_RS13550	0.89	-2.4
2,782,128	+				-0.2
2,782,129	-				-0.2
2,782,179	+				+1.3
2,782,284	+				-0.1
2,782,284	+				-0.7
2,782,284	+				+0.5
2,782,285	-				+1.5
2,782,285	-				+0.9
2,782,285	-				+0.2
2,782,285	-				+0.4
2,782,328	+				+0.1
2,782,454	+				-0.1
2,782,454	+				-0.3
2,782,455	-				+0.3
2,782,455	-				-0.3
2,782,455	-				+0.9
2,782,493	+				-2.8
2,782,493	+				+0.6
2,782,493	+				-1.2
2,782,493	+				-0.1
2,782,496	+				-1.4
2,782,497	-				-1.4
2,782,547	+				-0.1
2,782,547	+				+0.3
2,782,547	+				-2.4
2,782,547	+				+0.7
2,782,548	-				-0.3
2,782,568	+				+0.6
2,782,568	+				-0.2
2,782,568	+				-1.0
2,782,568	+				-0.4
2,782,569	-				-0.2
2,782,569	-				-0.0
2,782,793	+		ABIE41_RS13555	0.15	+0.4
2,782,793	+		ABIE41_RS13555	0.15	-0.4
2,782,793	+		ABIE41_RS13555	0.15	+1.9
2,782,793	+		ABIE41_RS13555	0.15	-0.2
2,782,793	+		ABIE41_RS13555	0.15	+0.5
2,782,794	-		ABIE41_RS13555	0.15	+0.5
2,782,794	-		ABIE41_RS13555	0.15	-0.1
2,782,868	+		ABIE41_RS13555	0.18	+0.5
2,782,869	-		ABIE41_RS13555	0.19	+1.1
2,782,997	+		ABIE41_RS13555	0.24	+0.9
2,782,998	-		ABIE41_RS13555	0.24	-0.2
2,782,998	-		ABIE41_RS13555	0.24	+1.0
2,782,998	-		ABIE41_RS13555	0.24	+0.2
2,783,012	+		ABIE41_RS13555	0.25	-1.5
2,783,013	-		ABIE41_RS13555	0.25	+0.5
2,783,013	-		ABIE41_RS13555	0.25	+0.1
2,783,013	-		ABIE41_RS13555	0.25	+0.9
2,783,111	+		ABIE41_RS13555	0.29	+0.1
2,783,111	+		ABIE41_RS13555	0.29	-0.2
2,783,111	+		ABIE41_RS13555	0.29	+0.9
2,783,112	-		ABIE41_RS13555	0.29	+0.3
2,783,112	-		ABIE41_RS13555	0.29	-0.3
2,783,112	-		ABIE41_RS13555	0.29	+0.4
2,783,112	-		ABIE41_RS13555	0.29	+0.0
2,783,139	-		ABIE41_RS13555	0.30	-0.1
2,783,139	-		ABIE41_RS13555	0.30	-0.4
2,783,141	-		ABIE41_RS13555	0.30	+1.1
2,783,232	-		ABIE41_RS13555	0.34	-1.0
2,783,324	+		ABIE41_RS13555	0.38	+0.7
2,783,324	+		ABIE41_RS13555	0.38	+0.7
2,783,342	+		ABIE41_RS13555	0.39	+0.4
2,783,343	-		ABIE41_RS13555	0.39	-2.2
2,783,343	-		ABIE41_RS13555	0.39	-2.9