Strain Fitness in Bosea sp. OAE506 around ABIE41_RS05275

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
1,091,638	+		ABIE41_RS05265	0.79	+1.6
1,091,638	+		ABIE41_RS05265	0.79	+0.5
1,091,639	-		ABIE41_RS05265	0.79	-0.2
1,091,799	+				-2.6
1,091,800	-				-0.0
1,091,800	-				-2.1
1,091,875	-				-0.2
1,091,877	+				+0.6
1,091,878	-				+1.3
1,091,962	+				+0.3
1,091,962	+				+0.1
1,092,146	+		ABIE41_RS05270	0.33	+0.4
1,092,147	+		ABIE41_RS05270	0.33	+3.2
1,092,147	+		ABIE41_RS05270	0.33	+0.1
1,092,147	+		ABIE41_RS05270	0.33	+0.4
1,092,147	+		ABIE41_RS05270	0.33	+0.5
1,092,147	+		ABIE41_RS05270	0.33	+0.9
1,092,147	+		ABIE41_RS05270	0.33	+0.4
1,092,148	-		ABIE41_RS05270	0.33	+0.1
1,092,148	-		ABIE41_RS05270	0.33	+1.0
1,092,148	-		ABIE41_RS05270	0.33	+0.2
1,092,148	-		ABIE41_RS05270	0.33	+0.5
1,092,148	-		ABIE41_RS05270	0.33	+2.8
1,092,148	-		ABIE41_RS05270	0.33	+0.1
1,092,148	-		ABIE41_RS05270	0.33	+0.5
1,092,150	-		ABIE41_RS05270	0.33	+1.6
1,092,237	+		ABIE41_RS05270	0.47	-0.3
1,092,237	+		ABIE41_RS05270	0.47	+0.6
1,092,237	+		ABIE41_RS05270	0.47	+0.7
1,092,237	+		ABIE41_RS05270	0.47	-0.4
1,092,238	-		ABIE41_RS05270	0.47	+0.2
1,092,238	-		ABIE41_RS05270	0.47	-0.3
1,092,238	-		ABIE41_RS05270	0.47	+1.3
1,092,238	-		ABIE41_RS05270	0.47	+0.0
1,092,238	-		ABIE41_RS05270	0.47	-0.5
1,092,385	-		ABIE41_RS05270	0.71	+0.5
1,092,385	-		ABIE41_RS05270	0.71	-0.4
1,092,508	+				+1.3
1,092,508	+				+0.5
1,092,508	+				-0.0
1,092,508	+				-1.5
1,092,508	+				-0.7
1,092,508	+				-0.5
1,092,508	+				+0.5
1,092,508	+				+0.2
1,092,508	+				-1.0
1,092,509	-				+0.4
1,092,509	-				+0.1
1,092,509	-				-0.7
1,092,509	-				+2.7
1,092,509	-				+0.4
1,092,509	-				+0.3
1,092,635	+				+0.5
1,092,951	+		ABIE41_RS05275	0.45	-0.0
1,092,951	+		ABIE41_RS05275	0.45	-0.4
1,092,952	-		ABIE41_RS05275	0.45	-0.0
1,092,952	-		ABIE41_RS05275	0.45	+0.1
1,092,952	-		ABIE41_RS05275	0.45	-0.4
1,092,952	-		ABIE41_RS05275	0.45	-2.4
1,093,116	+		ABIE41_RS05275	0.67	-0.4
1,093,116	+		ABIE41_RS05275	0.67	+2.0
1,093,116	+		ABIE41_RS05275	0.67	-0.4
1,093,116	+		ABIE41_RS05275	0.67	+1.2
1,093,117	-		ABIE41_RS05275	0.67	+1.0
1,093,332	+				+1.6
1,093,332	+				-0.8
1,093,333	-				-0.4
1,093,333	-				+0.3
1,093,333	-				+0.2
1,093,333	-				-0.6
1,093,405	+				+2.7
1,093,405	+				-1.6
1,093,408	+				+0.5
1,093,408	+				-0.2
1,093,408	+				+4.3
1,093,408	+				-0.6
1,093,408	+				+0.3
1,093,408	+				-0.9
1,093,408	+				+0.1
1,093,408	+				-0.4
1,093,409	-				+1.0
1,093,409	-				+0.2
1,093,409	-				+0.6
1,093,409	-				-0.1
1,093,409	-				-0.4
1,093,441	-		ABIE41_RS05280	0.16	+2.0
1,093,486	+		ABIE41_RS05280	0.33	-0.2
1,093,529	+		ABIE41_RS05280	0.49	+0.2
1,093,591	+		ABIE41_RS05280	0.71	+1.4
1,093,591	+		ABIE41_RS05280	0.71	-0.9
1,093,591	+		ABIE41_RS05280	0.71	+0.5
1,093,591	+		ABIE41_RS05280	0.71	+0.5
1,093,591	+		ABIE41_RS05280	0.71	-0.1
1,093,592	-		ABIE41_RS05280	0.72	-1.5
1,093,592	-		ABIE41_RS05280	0.72	+1.2
1,093,693	-				+2.3
1,093,710	-				-1.2
1,093,753	+				+0.9
1,093,754	-				+0.1
1,093,754	-				-1.1
1,093,754	-				+0.8
1,093,880	+				+0.2
1,093,880	+				+1.0
1,093,880	+				+0.5
1,093,881	-				+0.3
1,093,881	-				+0.1
1,093,881	-				-0.5
1,093,882	+				+0.8
1,093,882	+				+0.0
1,093,882	+				-0.4
1,093,883	-				+0.4
1,093,883	-				-0.2
1,093,883	-				+0.4
1,093,883	-				+2.6
1,093,980	+				+0.7
1,093,980	+				+1.5
1,093,980	+				+0.6
1,093,981	-				+1.2
1,093,981	-				-0.3
1,094,016	-				+1.7
1,094,016	-				-0.1
1,094,016	-				-0.3
1,094,052	+		ABIE41_RS05285	0.10	+1.5
1,094,052	+		ABIE41_RS05285	0.10	-4.0
1,094,059	+		ABIE41_RS05285	0.11	+1.6
1,094,059	+		ABIE41_RS05285	0.11	-0.0
1,094,060	-		ABIE41_RS05285	0.12	+0.8
1,094,067	+		ABIE41_RS05285	0.13	-0.6
1,094,067	+		ABIE41_RS05285	0.13	+0.8
1,094,067	+		ABIE41_RS05285	0.13	-1.8
1,094,067	+		ABIE41_RS05285	0.13	-1.0
1,094,068	-		ABIE41_RS05285	0.13	+0.3
1,094,068	-		ABIE41_RS05285	0.13	+0.8
1,094,068	-		ABIE41_RS05285	0.13	-1.6
1,094,069	+		ABIE41_RS05285	0.13	-1.0
1,094,069	+		ABIE41_RS05285	0.13	+0.3
1,094,069	+		ABIE41_RS05285	0.13	+1.0
1,094,070	-		ABIE41_RS05285	0.13	+1.4
1,094,185	-		ABIE41_RS05285	0.33	+0.1
1,094,259	+		ABIE41_RS05285	0.45	+1.0
1,094,259	+		ABIE41_RS05285	0.45	-0.4
1,094,259	+		ABIE41_RS05285	0.45	-0.2
1,094,259	+		ABIE41_RS05285	0.45	+1.2
1,094,259	+		ABIE41_RS05285	0.45	-1.0
1,094,259	+		ABIE41_RS05285	0.45	+0.6
1,094,259	+		ABIE41_RS05285	0.45	+1.2
1,094,259	+		ABIE41_RS05285	0.45	+1.6
1,094,259	+		ABIE41_RS05285	0.45	-0.4
1,094,259	+		ABIE41_RS05285	0.45	-0.7
1,094,259	+		ABIE41_RS05285	0.45	-3.3
1,094,260	-		ABIE41_RS05285	0.46	+0.1
1,094,260	-		ABIE41_RS05285	0.46	-0.5
1,094,260	-		ABIE41_RS05285	0.46	-0.6
1,094,260	-		ABIE41_RS05285	0.46	-0.0
1,094,260	-		ABIE41_RS05285	0.46	+1.3
1,094,260	-		ABIE41_RS05285	0.46	+0.3
1,094,260	-		ABIE41_RS05285	0.46	+1.2
1,094,260	-		ABIE41_RS05285	0.46	+0.0
1,094,260	-		ABIE41_RS05285	0.46	+0.5
1,094,260	-		ABIE41_RS05285	0.46	+0.6