Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS28520 and ABID97_RS28525 overlap by 4 nucleotides ABID97_RS28525 and ABID97_RS28530 are separated by 783 nucleotides
ABID97_RS28520: ABID97_RS28520 - leucyl aminopeptidase, at 624,675 to 625,727
_RS28520
ABID97_RS28525: ABID97_RS28525 - alpha/beta hydrolase, at 625,724 to 626,548
_RS28525
ABID97_RS28530: ABID97_RS28530 - VOC family protein, at 627,332 to 627,596
_RS28530
Position (kb) 625
626
627 Strain fitness (log2 ratio) -2
-1
0
1 at 624.856 kb on + strand, within ABID97_RS28520 at 624.994 kb on + strand, within ABID97_RS28520 at 624.995 kb on - strand, within ABID97_RS28520 at 624.998 kb on + strand, within ABID97_RS28520 at 624.999 kb on - strand, within ABID97_RS28520 at 625.123 kb on - strand, within ABID97_RS28520 at 625.249 kb on + strand, within ABID97_RS28520 at 625.319 kb on - strand, within ABID97_RS28520 at 625.749 kb on + strand at 625.750 kb on - strand at 625.846 kb on + strand, within ABID97_RS28525 at 625.847 kb on - strand, within ABID97_RS28525 at 625.990 kb on - strand, within ABID97_RS28525 at 626.145 kb on + strand, within ABID97_RS28525 at 626.171 kb on - strand, within ABID97_RS28525 at 626.331 kb on + strand, within ABID97_RS28525 at 626.496 kb on + strand at 626.497 kb on - strand at 626.497 kb on - strand at 626.497 kb on - strand at 626.497 kb on - strand at 626.847 kb on + strand at 626.950 kb on + strand at 626.951 kb on - strand at 626.951 kb on - strand at 626.951 kb on - strand at 626.968 kb on + strand at 626.969 kb on - strand at 627.010 kb on - strand at 627.010 kb on - strand at 627.163 kb on + strand at 627.163 kb on + strand at 627.164 kb on - strand at 627.164 kb on - strand at 627.349 kb on + strand at 627.413 kb on - strand, within ABID97_RS28530 at 627.427 kb on + strand, within ABID97_RS28530 at 627.428 kb on - strand, within ABID97_RS28530 at 627.447 kb on - strand, within ABID97_RS28530 at 627.447 kb on - strand, within ABID97_RS28530 at 627.489 kb on - strand, within ABID97_RS28530
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 624,856 + ABID97_RS28520 0.17 -0.4 624,994 + ABID97_RS28520 0.30 +0.3 624,995 - ABID97_RS28520 0.30 -0.4 624,998 + ABID97_RS28520 0.31 -0.3 624,999 - ABID97_RS28520 0.31 -1.1 625,123 - ABID97_RS28520 0.43 -0.1 625,249 + ABID97_RS28520 0.55 -0.6 625,319 - ABID97_RS28520 0.61 -0.3 625,749 + -0.2 625,750 - -0.3 625,846 + ABID97_RS28525 0.15 -0.0 625,847 - ABID97_RS28525 0.15 +0.3 625,990 - ABID97_RS28525 0.32 +0.7 626,145 + ABID97_RS28525 0.51 -0.4 626,171 - ABID97_RS28525 0.54 -0.1 626,331 + ABID97_RS28525 0.74 -0.5 626,496 + -0.3 626,497 - +0.6 626,497 - -1.1 626,497 - -0.1 626,497 - -0.5 626,847 + -0.4 626,950 + +0.8 626,951 - -0.3 626,951 - +0.4 626,951 - -0.3 626,968 + -0.7 626,969 - -1.9 627,010 - +0.0 627,010 - -0.1 627,163 + -0.8 627,163 + -0.2 627,164 - +0.5 627,164 - -0.2 627,349 + -1.6 627,413 - ABID97_RS28530 0.31 -0.8 627,427 + ABID97_RS28530 0.36 -0.6 627,428 - ABID97_RS28530 0.36 -0.6 627,447 - ABID97_RS28530 0.43 -0.4 627,447 - ABID97_RS28530 0.43 -0.4 627,489 - ABID97_RS28530 0.59 -0.3
Or see this region's nucleotide sequence