Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS10170 and ABID97_RS10175 are separated by 35 nucleotides ABID97_RS10175 and ABID97_RS10180 are separated by 4 nucleotides
ABID97_RS10170: ABID97_RS10170 - efflux transporter outer membrane subunit, at 2,110,455 to 2,111,903
_RS10170
ABID97_RS10175: ABID97_RS10175 - efflux RND transporter periplasmic adaptor subunit, at 2,111,939 to 2,113,195
_RS10175
ABID97_RS10180: ABID97_RS10180 - efflux RND transporter permease subunit, at 2,113,200 to 2,116,418
_RS10180
Position (kb)
2111
2112
2113
2114 Strain fitness (log2 ratio)
-1
0
1 at 2110.997 kb on - strand, within ABID97_RS10170 at 2111.389 kb on + strand, within ABID97_RS10170 at 2111.390 kb on - strand, within ABID97_RS10170 at 2111.390 kb on - strand, within ABID97_RS10170 at 2111.512 kb on + strand, within ABID97_RS10170 at 2111.572 kb on + strand, within ABID97_RS10170 at 2111.572 kb on + strand, within ABID97_RS10170 at 2111.572 kb on + strand, within ABID97_RS10170 at 2111.573 kb on - strand, within ABID97_RS10170 at 2111.573 kb on - strand, within ABID97_RS10170 at 2111.869 kb on + strand at 2111.870 kb on - strand at 2111.870 kb on - strand at 2112.243 kb on + strand, within ABID97_RS10175 at 2112.243 kb on + strand, within ABID97_RS10175 at 2112.243 kb on + strand, within ABID97_RS10175 at 2112.244 kb on - strand, within ABID97_RS10175 at 2112.417 kb on + strand, within ABID97_RS10175 at 2112.418 kb on - strand, within ABID97_RS10175 at 2112.418 kb on - strand, within ABID97_RS10175 at 2112.438 kb on + strand, within ABID97_RS10175 at 2112.439 kb on - strand, within ABID97_RS10175 at 2112.439 kb on - strand, within ABID97_RS10175 at 2112.439 kb on - strand, within ABID97_RS10175 at 2112.470 kb on - strand, within ABID97_RS10175 at 2112.870 kb on + strand, within ABID97_RS10175 at 2113.720 kb on + strand, within ABID97_RS10180 at 2113.900 kb on + strand, within ABID97_RS10180 at 2113.900 kb on + strand, within ABID97_RS10180 at 2113.901 kb on - strand, within ABID97_RS10180 at 2114.069 kb on - strand, within ABID97_RS10180 at 2114.069 kb on - strand, within ABID97_RS10180 at 2114.069 kb on - strand, within ABID97_RS10180
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 2,110,997 - ABID97_RS10170 0.37 -0.1 2,111,389 + ABID97_RS10170 0.64 -1.5 2,111,390 - ABID97_RS10170 0.65 +0.9 2,111,390 - ABID97_RS10170 0.65 +0.4 2,111,512 + ABID97_RS10170 0.73 +0.5 2,111,572 + ABID97_RS10170 0.77 +0.4 2,111,572 + ABID97_RS10170 0.77 -0.1 2,111,572 + ABID97_RS10170 0.77 -0.1 2,111,573 - ABID97_RS10170 0.77 +0.6 2,111,573 - ABID97_RS10170 0.77 +0.0 2,111,869 + -0.3 2,111,870 - +0.8 2,111,870 - -0.5 2,112,243 + ABID97_RS10175 0.24 +0.5 2,112,243 + ABID97_RS10175 0.24 +0.4 2,112,243 + ABID97_RS10175 0.24 -0.4 2,112,244 - ABID97_RS10175 0.24 +1.1 2,112,417 + ABID97_RS10175 0.38 +1.0 2,112,418 - ABID97_RS10175 0.38 +0.7 2,112,418 - ABID97_RS10175 0.38 +0.4 2,112,438 + ABID97_RS10175 0.40 +0.6 2,112,439 - ABID97_RS10175 0.40 -0.1 2,112,439 - ABID97_RS10175 0.40 -0.7 2,112,439 - ABID97_RS10175 0.40 -0.4 2,112,470 - ABID97_RS10175 0.42 +0.3 2,112,870 + ABID97_RS10175 0.74 +1.6 2,113,720 + ABID97_RS10180 0.16 +1.7 2,113,900 + ABID97_RS10180 0.22 +0.8 2,113,900 + ABID97_RS10180 0.22 +0.3 2,113,901 - ABID97_RS10180 0.22 -0.0 2,114,069 - ABID97_RS10180 0.27 +0.1 2,114,069 - ABID97_RS10180 0.27 +0.0 2,114,069 - ABID97_RS10180 0.27 -0.1
Or see this region's nucleotide sequence