Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS08150 and ABID97_RS08155 are separated by 9 nucleotides ABID97_RS08155 and ABID97_RS08160 are separated by 38 nucleotides ABID97_RS08160 and ABID97_RS08165 are separated by 22 nucleotides ABID97_RS08165 and ABID97_RS08170 are separated by 201 nucleotides
ABID97_RS08150: ABID97_RS08150 - OpgC domain-containing protein, at 1,712,715 to 1,713,857
_RS08150
ABID97_RS08155: ABID97_RS08155 - SGNH/GDSL hydrolase family protein, at 1,713,867 to 1,714,667
_RS08155
ABID97_RS08160: ABID97_RS08160 - anti-sigma factor, at 1,714,706 to 1,715,455
_RS08160
ABID97_RS08165: ABID97_RS08165 - sigma-70 family RNA polymerase sigma factor, at 1,715,478 to 1,716,053
_RS08165
ABID97_RS08170: ABID97_RS08170 - DUF3455 domain-containing protein, at 1,716,255 to 1,716,800
_RS08170
Position (kb) 1714
1715
1716 Strain fitness (log2 ratio) -1
0
1 at 1713.777 kb on + strand at 1713.778 kb on - strand at 1714.075 kb on + strand, within ABID97_RS08155 at 1714.075 kb on + strand, within ABID97_RS08155 at 1714.075 kb on + strand, within ABID97_RS08155 at 1714.075 kb on + strand, within ABID97_RS08155 at 1714.103 kb on - strand, within ABID97_RS08155 at 1714.291 kb on + strand, within ABID97_RS08155 at 1714.292 kb on - strand, within ABID97_RS08155 at 1714.315 kb on + strand, within ABID97_RS08155 at 1714.544 kb on - strand, within ABID97_RS08155 at 1714.586 kb on - strand, within ABID97_RS08155 at 1714.938 kb on + strand, within ABID97_RS08160 at 1714.939 kb on - strand, within ABID97_RS08160 at 1715.480 kb on - strand at 1715.599 kb on + strand, within ABID97_RS08165 at 1715.600 kb on - strand, within ABID97_RS08165 at 1716.154 kb on + strand at 1716.337 kb on - strand, within ABID97_RS08170 at 1716.337 kb on - strand, within ABID97_RS08170 at 1716.337 kb on - strand, within ABID97_RS08170 at 1716.423 kb on + strand, within ABID97_RS08170 at 1716.423 kb on + strand, within ABID97_RS08170 at 1716.423 kb on + strand, within ABID97_RS08170 at 1716.424 kb on - strand, within ABID97_RS08170 at 1716.424 kb on - strand, within ABID97_RS08170
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 1,713,777 + -0.2 1,713,778 - +0.5 1,714,075 + ABID97_RS08155 0.26 +0.0 1,714,075 + ABID97_RS08155 0.26 +0.3 1,714,075 + ABID97_RS08155 0.26 +0.3 1,714,075 + ABID97_RS08155 0.26 -0.3 1,714,103 - ABID97_RS08155 0.29 +1.4 1,714,291 + ABID97_RS08155 0.53 +0.7 1,714,292 - ABID97_RS08155 0.53 -0.8 1,714,315 + ABID97_RS08155 0.56 +1.0 1,714,544 - ABID97_RS08155 0.85 +0.4 1,714,586 - ABID97_RS08155 0.90 +0.6 1,714,938 + ABID97_RS08160 0.31 -0.0 1,714,939 - ABID97_RS08160 0.31 -0.9 1,715,480 - -1.0 1,715,599 + ABID97_RS08165 0.21 +0.3 1,715,600 - ABID97_RS08165 0.21 -0.4 1,716,154 + +0.4 1,716,337 - ABID97_RS08170 0.15 -0.4 1,716,337 - ABID97_RS08170 0.15 -0.2 1,716,337 - ABID97_RS08170 0.15 +0.3 1,716,423 + ABID97_RS08170 0.31 -1.1 1,716,423 + ABID97_RS08170 0.31 +0.6 1,716,423 + ABID97_RS08170 0.31 +0.3 1,716,424 - ABID97_RS08170 0.31 +0.2 1,716,424 - ABID97_RS08170 0.31 +0.6
Or see this region's nucleotide sequence