Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS01430 and ABID97_RS01435 overlap by 4 nucleotides ABID97_RS01435 and ABID97_RS01440 are separated by 4 nucleotides ABID97_RS01440 and ABID97_RS01445 are separated by 5 nucleotides
ABID97_RS01430: ABID97_RS01430 - MarR family transcriptional regulator, at 289,988 to 290,464
_RS01430
ABID97_RS01435: ABID97_RS01435 - enoyl-CoA hydratase family protein, at 290,461 to 291,315
_RS01435
ABID97_RS01440: ABID97_RS01440 - acyl-CoA dehydrogenase family protein, at 291,320 to 292,513
_RS01440
ABID97_RS01445: ABID97_RS01445 - AMP-binding protein, at 292,519 to 294,144
_RS01445
Position (kb) 291
292
293 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 290.471 kb on - strand at 290.471 kb on - strand at 290.521 kb on + strand at 290.617 kb on + strand, within ABID97_RS01435 at 290.618 kb on - strand, within ABID97_RS01435 at 290.618 kb on - strand, within ABID97_RS01435 at 290.653 kb on + strand, within ABID97_RS01435 at 290.940 kb on - strand, within ABID97_RS01435 at 290.940 kb on - strand, within ABID97_RS01435 at 291.506 kb on + strand, within ABID97_RS01440 at 291.680 kb on + strand, within ABID97_RS01440 at 291.680 kb on + strand, within ABID97_RS01440 at 291.680 kb on + strand, within ABID97_RS01440 at 291.848 kb on + strand, within ABID97_RS01440 at 291.849 kb on - strand, within ABID97_RS01440 at 291.849 kb on - strand, within ABID97_RS01440 at 291.849 kb on - strand, within ABID97_RS01440 at 291.849 kb on - strand, within ABID97_RS01440 at 292.245 kb on - strand, within ABID97_RS01440 at 292.245 kb on - strand, within ABID97_RS01440 at 292.427 kb on + strand at 292.454 kb on + strand at 292.454 kb on + strand at 292.454 kb on + strand at 292.455 kb on - strand at 292.455 kb on - strand at 292.455 kb on - strand at 292.455 kb on - strand at 292.455 kb on - strand at 292.455 kb on - strand at 292.511 kb on + strand at 293.282 kb on + strand, within ABID97_RS01445 at 293.312 kb on - strand, within ABID97_RS01445 at 293.312 kb on - strand, within ABID97_RS01445 at 293.312 kb on - strand, within ABID97_RS01445 at 293.383 kb on + strand, within ABID97_RS01445
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 290,471 - -4.1 290,471 - -1.7 290,521 + -3.7 290,617 + ABID97_RS01435 0.18 -4.5 290,618 - ABID97_RS01435 0.18 -5.3 290,618 - ABID97_RS01435 0.18 -1.1 290,653 + ABID97_RS01435 0.22 -5.2 290,940 - ABID97_RS01435 0.56 -1.7 290,940 - ABID97_RS01435 0.56 -2.6 291,506 + ABID97_RS01440 0.16 -3.4 291,680 + ABID97_RS01440 0.30 -3.1 291,680 + ABID97_RS01440 0.30 -3.4 291,680 + ABID97_RS01440 0.30 -4.1 291,848 + ABID97_RS01440 0.44 -1.7 291,849 - ABID97_RS01440 0.44 -4.2 291,849 - ABID97_RS01440 0.44 -4.1 291,849 - ABID97_RS01440 0.44 -2.9 291,849 - ABID97_RS01440 0.44 -2.4 292,245 - ABID97_RS01440 0.77 -1.9 292,245 - ABID97_RS01440 0.77 -0.7 292,427 + -3.3 292,454 + -4.0 292,454 + -2.6 292,454 + -3.5 292,455 - -4.6 292,455 - -2.7 292,455 - -2.5 292,455 - -4.6 292,455 - -2.7 292,455 - -2.8 292,511 + -2.2 293,282 + ABID97_RS01445 0.47 -1.6 293,312 - ABID97_RS01445 0.49 -2.9 293,312 - ABID97_RS01445 0.49 -2.4 293,312 - ABID97_RS01445 0.49 -2.3 293,383 + ABID97_RS01445 0.53 -1.4
Or see this region's nucleotide sequence