Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS00985 and ABID97_RS00990 overlap by 4 nucleotides ABID97_RS00990 and ABID97_RS00995 overlap by 4 nucleotides ABID97_RS00995 and ABID97_RS01000 are separated by 98 nucleotides
ABID97_RS00985: ABID97_RS00985 - glycosyltransferase, at 198,908 to 200,047
_RS00985
ABID97_RS00990: ABID97_RS00990 - hypothetical protein, at 200,044 to 200,538
_RS00990
ABID97_RS00995: ABID97_RS00995 - tyrosine-protein phosphatase, at 200,535 to 201,065
_RS00995
ABID97_RS01000: ABID97_RS01000 - zinc-binding dehydrogenase, at 201,164 to 202,294
_RS01000
Position (kb) 200
201
202 Strain fitness (log2 ratio) -1
0
1 at 199.902 kb on - strand, within ABID97_RS00985 at 199.922 kb on + strand, within ABID97_RS00985 at 199.923 kb on - strand, within ABID97_RS00985 at 200.749 kb on + strand, within ABID97_RS00995 at 200.749 kb on + strand, within ABID97_RS00995 at 200.992 kb on - strand, within ABID97_RS00995 at 201.095 kb on + strand at 201.095 kb on + strand at 201.096 kb on - strand at 201.096 kb on - strand at 201.097 kb on + strand at 201.097 kb on + strand at 201.098 kb on - strand at 201.130 kb on + strand at 201.533 kb on + strand, within ABID97_RS01000 at 201.534 kb on - strand, within ABID97_RS01000 at 201.534 kb on - strand, within ABID97_RS01000 at 201.809 kb on + strand, within ABID97_RS01000 at 201.809 kb on + strand, within ABID97_RS01000 at 201.809 kb on + strand, within ABID97_RS01000 at 201.809 kb on + strand, within ABID97_RS01000 at 201.809 kb on + strand, within ABID97_RS01000 at 201.810 kb on - strand, within ABID97_RS01000 at 201.969 kb on - strand, within ABID97_RS01000 at 202.004 kb on + strand, within ABID97_RS01000 at 202.004 kb on + strand, within ABID97_RS01000 at 202.004 kb on + strand, within ABID97_RS01000 at 202.004 kb on + strand, within ABID97_RS01000 at 202.010 kb on + strand, within ABID97_RS01000 at 202.011 kb on - strand, within ABID97_RS01000 at 202.011 kb on - strand, within ABID97_RS01000 at 202.011 kb on - strand, within ABID97_RS01000
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 199,902 - ABID97_RS00985 0.87 +0.5 199,922 + ABID97_RS00985 0.89 -0.1 199,923 - ABID97_RS00985 0.89 -0.6 200,749 + ABID97_RS00995 0.40 -0.4 200,749 + ABID97_RS00995 0.40 -0.2 200,992 - ABID97_RS00995 0.86 -0.7 201,095 + +0.4 201,095 + +0.5 201,096 - -0.2 201,096 - +0.1 201,097 + +0.3 201,097 + +0.0 201,098 - +0.4 201,130 + -0.8 201,533 + ABID97_RS01000 0.33 -0.3 201,534 - ABID97_RS01000 0.33 +0.1 201,534 - ABID97_RS01000 0.33 -0.3 201,809 + ABID97_RS01000 0.57 +0.3 201,809 + ABID97_RS01000 0.57 -0.2 201,809 + ABID97_RS01000 0.57 +0.6 201,809 + ABID97_RS01000 0.57 -0.3 201,809 + ABID97_RS01000 0.57 +0.1 201,810 - ABID97_RS01000 0.57 -0.2 201,969 - ABID97_RS01000 0.71 -0.1 202,004 + ABID97_RS01000 0.74 +0.0 202,004 + ABID97_RS01000 0.74 -0.7 202,004 + ABID97_RS01000 0.74 +1.5 202,004 + ABID97_RS01000 0.74 -0.3 202,010 + ABID97_RS01000 0.75 +0.2 202,011 - ABID97_RS01000 0.75 +0.3 202,011 - ABID97_RS01000 0.75 +0.4 202,011 - ABID97_RS01000 0.75 +0.0
Or see this region's nucleotide sequence