Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS00810 and ABID97_RS00815 are separated by 34 nucleotides ABID97_RS00815 and ABID97_RS00820 are separated by 44 nucleotides
ABID97_RS00810: ABID97_RS00810 - 3-hydroxybutyryl-CoA dehydrogenase, at 160,769 to 161,617
_RS00810
ABID97_RS00815: ABID97_RS00815 - crotonase/enoyl-CoA hydratase family protein, at 161,652 to 162,467
_RS00815
ABID97_RS00820: ABID97_RS00820 - serine hydrolase, at 162,512 to 163,846
_RS00820
Position (kb) 161
162
163 Strain fitness (log2 ratio) -2
-1
0
1 at 161.508 kb on - strand, within ABID97_RS00810 at 161.612 kb on + strand at 161.793 kb on + strand, within ABID97_RS00815 at 161.793 kb on + strand, within ABID97_RS00815 at 161.793 kb on + strand, within ABID97_RS00815 at 161.794 kb on - strand, within ABID97_RS00815 at 161.794 kb on - strand, within ABID97_RS00815 at 161.893 kb on - strand, within ABID97_RS00815 at 161.893 kb on - strand, within ABID97_RS00815 at 162.899 kb on + strand, within ABID97_RS00820 at 162.942 kb on - strand, within ABID97_RS00820 at 162.942 kb on - strand, within ABID97_RS00820 at 162.950 kb on + strand, within ABID97_RS00820 at 163.077 kb on - strand, within ABID97_RS00820 at 163.103 kb on + strand, within ABID97_RS00820 at 163.166 kb on + strand, within ABID97_RS00820 at 163.235 kb on + strand, within ABID97_RS00820 at 163.236 kb on - strand, within ABID97_RS00820 at 163.428 kb on - strand, within ABID97_RS00820 at 163.428 kb on - strand, within ABID97_RS00820
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 161,508 - ABID97_RS00810 0.87 -0.6 161,612 + -2.0 161,793 + ABID97_RS00815 0.17 -0.5 161,793 + ABID97_RS00815 0.17 -1.2 161,793 + ABID97_RS00815 0.17 -0.5 161,794 - ABID97_RS00815 0.17 -0.1 161,794 - ABID97_RS00815 0.17 -0.3 161,893 - ABID97_RS00815 0.30 +0.4 161,893 - ABID97_RS00815 0.30 +0.1 162,899 + ABID97_RS00820 0.29 -1.1 162,942 - ABID97_RS00820 0.32 -0.1 162,942 - ABID97_RS00820 0.32 +0.1 162,950 + ABID97_RS00820 0.33 -0.4 163,077 - ABID97_RS00820 0.42 -0.3 163,103 + ABID97_RS00820 0.44 -1.1 163,166 + ABID97_RS00820 0.49 +0.0 163,235 + ABID97_RS00820 0.54 +0.5 163,236 - ABID97_RS00820 0.54 -1.7 163,428 - ABID97_RS00820 0.69 -0.2 163,428 - ABID97_RS00820 0.69 -1.1
Or see this region's nucleotide sequence