Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_5121 and PfGW456L13_5122 are separated by 512 nucleotides PfGW456L13_5122 and PfGW456L13_5123 are separated by 31 nucleotides PfGW456L13_5123 and PfGW456L13_5124 are separated by 259 nucleotides
PfGW456L13_5121 - hypothetical protein, at 5,713,602 to 5,713,865
_5121
PfGW456L13_5122 - PAP2 superfamily protein, at 5,714,378 to 5,715,205
_5122
PfGW456L13_5123 - Ais protein, putative, at 5,715,237 to 5,715,908
_5123
PfGW456L13_5124 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 5,716,168 to 5,718,087
_5124
Position (kb)
5714
5715
5716 Strain fitness (log2 ratio)
-2
-1
0
1 at 5713.429 kb on + strand at 5713.430 kb on - strand at 5713.606 kb on + strand at 5713.606 kb on + strand at 5713.607 kb on - strand at 5713.607 kb on - strand at 5713.607 kb on - strand at 5713.787 kb on - strand, within PfGW456L13_5121 at 5713.849 kb on + strand at 5713.849 kb on + strand at 5713.849 kb on + strand at 5713.850 kb on - strand at 5713.850 kb on - strand at 5713.850 kb on - strand at 5713.924 kb on + strand at 5713.924 kb on + strand at 5713.936 kb on + strand at 5713.936 kb on + strand at 5713.936 kb on + strand at 5713.936 kb on + strand at 5713.937 kb on - strand at 5713.943 kb on + strand at 5713.944 kb on - strand at 5713.991 kb on + strand at 5714.022 kb on + strand at 5714.022 kb on + strand at 5714.023 kb on - strand at 5714.023 kb on - strand at 5714.023 kb on - strand at 5714.023 kb on - strand at 5714.073 kb on + strand at 5714.073 kb on + strand at 5714.142 kb on + strand at 5714.143 kb on - strand at 5714.146 kb on + strand at 5714.146 kb on + strand at 5714.146 kb on + strand at 5714.146 kb on + strand at 5714.146 kb on + strand at 5714.147 kb on - strand at 5714.147 kb on - strand at 5714.147 kb on - strand at 5714.147 kb on - strand at 5714.164 kb on - strand at 5714.219 kb on + strand at 5714.219 kb on + strand at 5714.219 kb on + strand at 5714.220 kb on - strand at 5714.220 kb on - strand at 5714.220 kb on - strand at 5714.220 kb on - strand at 5714.220 kb on - strand at 5714.220 kb on - strand at 5714.529 kb on + strand, within PfGW456L13_5122 at 5714.529 kb on + strand, within PfGW456L13_5122 at 5714.529 kb on + strand, within PfGW456L13_5122 at 5714.530 kb on - strand, within PfGW456L13_5122 at 5714.530 kb on - strand, within PfGW456L13_5122 at 5714.530 kb on - strand, within PfGW456L13_5122 at 5714.530 kb on - strand, within PfGW456L13_5122 at 5714.530 kb on - strand, within PfGW456L13_5122 at 5714.530 kb on - strand, within PfGW456L13_5122 at 5714.547 kb on - strand, within PfGW456L13_5122 at 5714.562 kb on + strand, within PfGW456L13_5122 at 5714.562 kb on + strand, within PfGW456L13_5122 at 5714.562 kb on + strand, within PfGW456L13_5122 at 5714.563 kb on - strand, within PfGW456L13_5122 at 5714.563 kb on - strand, within PfGW456L13_5122 at 5714.563 kb on - strand, within PfGW456L13_5122 at 5714.589 kb on + strand, within PfGW456L13_5122 at 5714.589 kb on + strand, within PfGW456L13_5122 at 5714.589 kb on + strand, within PfGW456L13_5122 at 5714.589 kb on + strand, within PfGW456L13_5122 at 5714.589 kb on + strand, within PfGW456L13_5122 at 5714.589 kb on + strand, within PfGW456L13_5122 at 5714.589 kb on + strand, within PfGW456L13_5122 at 5714.589 kb on + strand, within PfGW456L13_5122 at 5714.589 kb on + strand, within PfGW456L13_5122 at 5714.589 kb on + strand, within PfGW456L13_5122 at 5714.590 kb on - strand, within PfGW456L13_5122 at 5714.590 kb on - strand, within PfGW456L13_5122 at 5714.590 kb on - strand, within PfGW456L13_5122 at 5714.590 kb on - strand, within PfGW456L13_5122 at 5714.590 kb on - strand, within PfGW456L13_5122 at 5714.590 kb on - strand, within PfGW456L13_5122 at 5714.638 kb on - strand, within PfGW456L13_5122 at 5714.638 kb on - strand, within PfGW456L13_5122 at 5714.638 kb on - strand, within PfGW456L13_5122 at 5714.727 kb on + strand, within PfGW456L13_5122 at 5714.758 kb on - strand, within PfGW456L13_5122 at 5714.782 kb on - strand, within PfGW456L13_5122 at 5714.782 kb on - strand, within PfGW456L13_5122 at 5714.782 kb on - strand, within PfGW456L13_5122 at 5714.782 kb on - strand, within PfGW456L13_5122 at 5714.806 kb on - strand, within PfGW456L13_5122 at 5714.847 kb on + strand, within PfGW456L13_5122 at 5714.847 kb on + strand, within PfGW456L13_5122 at 5714.847 kb on + strand, within PfGW456L13_5122 at 5714.848 kb on - strand, within PfGW456L13_5122 at 5714.848 kb on - strand, within PfGW456L13_5122 at 5715.066 kb on + strand, within PfGW456L13_5122 at 5715.067 kb on - strand, within PfGW456L13_5122 at 5715.067 kb on - strand, within PfGW456L13_5122 at 5715.067 kb on - strand, within PfGW456L13_5122 at 5715.183 kb on + strand at 5715.184 kb on - strand at 5715.317 kb on + strand, within PfGW456L13_5123 at 5715.413 kb on + strand, within PfGW456L13_5123 at 5715.413 kb on + strand, within PfGW456L13_5123 at 5715.414 kb on - strand, within PfGW456L13_5123 at 5715.423 kb on + strand, within PfGW456L13_5123 at 5715.547 kb on + strand, within PfGW456L13_5123 at 5715.547 kb on + strand, within PfGW456L13_5123 at 5715.548 kb on - strand, within PfGW456L13_5123 at 5715.548 kb on - strand, within PfGW456L13_5123 at 5715.548 kb on - strand, within PfGW456L13_5123 at 5715.548 kb on - strand, within PfGW456L13_5123 at 5715.548 kb on - strand, within PfGW456L13_5123 at 5715.548 kb on - strand, within PfGW456L13_5123 at 5715.900 kb on + strand at 5715.900 kb on + strand at 5715.900 kb on + strand at 5715.934 kb on + strand at 5715.935 kb on - strand at 5715.935 kb on - strand at 5716.017 kb on - strand at 5716.076 kb on + strand at 5716.076 kb on + strand at 5716.076 kb on + strand at 5716.076 kb on + strand at 5716.076 kb on + strand at 5716.087 kb on + strand at 5716.087 kb on + strand at 5716.087 kb on + strand at 5716.087 kb on + strand at 5716.088 kb on - strand at 5716.088 kb on - strand at 5716.088 kb on - strand at 5716.088 kb on - strand at 5716.088 kb on - strand at 5716.088 kb on - strand at 5716.088 kb on - strand at 5716.088 kb on - strand at 5716.088 kb on - strand at 5716.088 kb on - strand at 5716.088 kb on - strand at 5716.145 kb on + strand at 5716.145 kb on + strand at 5716.146 kb on - strand at 5716.173 kb on + strand at 5716.173 kb on + strand at 5716.173 kb on + strand at 5716.173 kb on + strand at 5716.173 kb on + strand at 5716.173 kb on + strand at 5716.173 kb on + strand at 5716.174 kb on - strand at 5716.174 kb on - strand at 5716.174 kb on - strand at 5716.174 kb on - strand at 5716.174 kb on - strand at 5716.174 kb on - strand at 5716.174 kb on - strand at 5716.174 kb on - strand at 5716.174 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,713,429 + -0.0 5,713,430 - -1.6 5,713,606 + -0.0 5,713,606 + -0.6 5,713,607 - -0.0 5,713,607 - +0.8 5,713,607 - +0.2 5,713,787 - PfGW456L13_5121 0.70 +0.5 5,713,849 + -2.4 5,713,849 + -0.1 5,713,849 + -0.2 5,713,850 - +1.3 5,713,850 - -0.3 5,713,850 - -0.2 5,713,924 + +1.3 5,713,924 + -1.6 5,713,936 + +0.7 5,713,936 + +0.0 5,713,936 + +0.6 5,713,936 + +0.8 5,713,937 - +0.7 5,713,943 + -0.4 5,713,944 - +0.0 5,713,991 + +0.4 5,714,022 + -0.8 5,714,022 + -1.2 5,714,023 - -0.1 5,714,023 - +0.8 5,714,023 - +0.3 5,714,023 - +0.2 5,714,073 + -0.6 5,714,073 + -0.1 5,714,142 + -0.1 5,714,143 - +1.0 5,714,146 + -0.2 5,714,146 + +0.7 5,714,146 + +0.1 5,714,146 + +0.0 5,714,146 + +0.2 5,714,147 - -1.0 5,714,147 - -0.4 5,714,147 - +0.2 5,714,147 - -0.6 5,714,164 - -0.6 5,714,219 + +0.5 5,714,219 + +0.1 5,714,219 + +0.1 5,714,220 - -0.4 5,714,220 - -0.7 5,714,220 - -1.7 5,714,220 - -1.1 5,714,220 - +0.3 5,714,220 - +0.3 5,714,529 + PfGW456L13_5122 0.18 +0.4 5,714,529 + PfGW456L13_5122 0.18 -0.3 5,714,529 + PfGW456L13_5122 0.18 -0.2 5,714,530 - PfGW456L13_5122 0.18 -0.8 5,714,530 - PfGW456L13_5122 0.18 -1.6 5,714,530 - PfGW456L13_5122 0.18 -0.1 5,714,530 - PfGW456L13_5122 0.18 -0.7 5,714,530 - PfGW456L13_5122 0.18 -0.0 5,714,530 - PfGW456L13_5122 0.18 -1.3 5,714,547 - PfGW456L13_5122 0.20 +0.4 5,714,562 + PfGW456L13_5122 0.22 +1.1 5,714,562 + PfGW456L13_5122 0.22 -0.9 5,714,562 + PfGW456L13_5122 0.22 +0.1 5,714,563 - PfGW456L13_5122 0.22 -0.6 5,714,563 - PfGW456L13_5122 0.22 +0.7 5,714,563 - PfGW456L13_5122 0.22 +0.8 5,714,589 + PfGW456L13_5122 0.25 -0.3 5,714,589 + PfGW456L13_5122 0.25 -0.3 5,714,589 + PfGW456L13_5122 0.25 -0.1 5,714,589 + PfGW456L13_5122 0.25 +1.2 5,714,589 + PfGW456L13_5122 0.25 -1.0 5,714,589 + PfGW456L13_5122 0.25 -0.3 5,714,589 + PfGW456L13_5122 0.25 -1.0 5,714,589 + PfGW456L13_5122 0.25 -0.2 5,714,589 + PfGW456L13_5122 0.25 +1.1 5,714,589 + PfGW456L13_5122 0.25 +1.6 5,714,590 - PfGW456L13_5122 0.26 +0.4 5,714,590 - PfGW456L13_5122 0.26 -0.9 5,714,590 - PfGW456L13_5122 0.26 +1.1 5,714,590 - PfGW456L13_5122 0.26 +0.0 5,714,590 - PfGW456L13_5122 0.26 -1.4 5,714,590 - PfGW456L13_5122 0.26 +0.2 5,714,638 - PfGW456L13_5122 0.31 -0.9 5,714,638 - PfGW456L13_5122 0.31 -0.3 5,714,638 - PfGW456L13_5122 0.31 +0.3 5,714,727 + PfGW456L13_5122 0.42 +1.2 5,714,758 - PfGW456L13_5122 0.46 +0.2 5,714,782 - PfGW456L13_5122 0.49 -0.4 5,714,782 - PfGW456L13_5122 0.49 -0.3 5,714,782 - PfGW456L13_5122 0.49 -0.0 5,714,782 - PfGW456L13_5122 0.49 +0.0 5,714,806 - PfGW456L13_5122 0.52 -0.4 5,714,847 + PfGW456L13_5122 0.57 +0.6 5,714,847 + PfGW456L13_5122 0.57 -0.1 5,714,847 + PfGW456L13_5122 0.57 +0.8 5,714,848 - PfGW456L13_5122 0.57 +0.3 5,714,848 - PfGW456L13_5122 0.57 +0.2 5,715,066 + PfGW456L13_5122 0.83 -0.2 5,715,067 - PfGW456L13_5122 0.83 -0.3 5,715,067 - PfGW456L13_5122 0.83 -0.4 5,715,067 - PfGW456L13_5122 0.83 -1.3 5,715,183 + -0.2 5,715,184 - -0.2 5,715,317 + PfGW456L13_5123 0.12 +1.0 5,715,413 + PfGW456L13_5123 0.26 +0.5 5,715,413 + PfGW456L13_5123 0.26 -0.3 5,715,414 - PfGW456L13_5123 0.26 -0.4 5,715,423 + PfGW456L13_5123 0.28 -0.4 5,715,547 + PfGW456L13_5123 0.46 -0.3 5,715,547 + PfGW456L13_5123 0.46 -0.4 5,715,548 - PfGW456L13_5123 0.46 +0.2 5,715,548 - PfGW456L13_5123 0.46 -2.2 5,715,548 - PfGW456L13_5123 0.46 +0.1 5,715,548 - PfGW456L13_5123 0.46 -0.4 5,715,548 - PfGW456L13_5123 0.46 -0.6 5,715,548 - PfGW456L13_5123 0.46 -0.3 5,715,900 + +0.3 5,715,900 + -0.4 5,715,900 + +0.0 5,715,934 + -0.3 5,715,935 - -0.3 5,715,935 - +0.4 5,716,017 - -0.0 5,716,076 + +0.4 5,716,076 + +0.1 5,716,076 + +0.6 5,716,076 + +0.7 5,716,076 + +0.3 5,716,087 + -0.3 5,716,087 + -1.4 5,716,087 + -1.8 5,716,087 + -0.2 5,716,088 - -0.0 5,716,088 - -1.1 5,716,088 - +0.6 5,716,088 - +0.5 5,716,088 - -0.0 5,716,088 - -0.3 5,716,088 - +0.9 5,716,088 - -0.3 5,716,088 - -0.3 5,716,088 - -0.0 5,716,088 - -0.6 5,716,145 + +0.0 5,716,145 + -0.0 5,716,146 - -0.5 5,716,173 + +0.4 5,716,173 + -0.4 5,716,173 + -0.5 5,716,173 + +0.4 5,716,173 + +1.3 5,716,173 + +1.6 5,716,173 + -0.1 5,716,174 - +0.1 5,716,174 - +0.3 5,716,174 - +0.3 5,716,174 - -1.4 5,716,174 - -0.4 5,716,174 - -0.0 5,716,174 - -0.0 5,716,174 - -0.0 5,716,174 - -0.0
Or see this region's nucleotide sequence