Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3152 and PfGW456L13_3153 are separated by 426 nucleotides PfGW456L13_3153 and PfGW456L13_3154 are separated by 57 nucleotides PfGW456L13_3154 and PfGW456L13_3155 are separated by 312 nucleotides
PfGW456L13_3152 - Transcriptional regulator, GntR family, at 3,530,228 to 3,530,914
_3152
PfGW456L13_3153 - hypothetical protein, at 3,531,341 to 3,531,502
_3153
PfGW456L13_3154 - hypothetical protein, at 3,531,560 to 3,532,090
_3154
PfGW456L13_3155 - L-Proline/Glycine betaine transporter ProP, at 3,532,403 to 3,533,692
_3155
Position (kb)
3531
3532
3533 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3530.651 kb on + strand, within PfGW456L13_3152 at 3530.651 kb on + strand, within PfGW456L13_3152 at 3530.652 kb on - strand, within PfGW456L13_3152 at 3530.661 kb on + strand, within PfGW456L13_3152 at 3530.662 kb on - strand, within PfGW456L13_3152 at 3530.751 kb on + strand at 3530.751 kb on + strand, within PfGW456L13_3152 at 3530.751 kb on + strand, within PfGW456L13_3152 at 3530.751 kb on + strand, within PfGW456L13_3152 at 3530.752 kb on - strand, within PfGW456L13_3152 at 3530.752 kb on - strand, within PfGW456L13_3152 at 3530.752 kb on - strand, within PfGW456L13_3152 at 3530.778 kb on - strand, within PfGW456L13_3152 at 3530.778 kb on - strand, within PfGW456L13_3152 at 3530.778 kb on - strand, within PfGW456L13_3152 at 3530.889 kb on + strand at 3531.119 kb on + strand at 3531.254 kb on + strand at 3531.255 kb on - strand at 3531.323 kb on + strand at 3531.323 kb on + strand at 3531.406 kb on + strand at 3531.407 kb on - strand, within PfGW456L13_3153 at 3531.414 kb on + strand, within PfGW456L13_3153 at 3531.414 kb on + strand, within PfGW456L13_3153 at 3531.414 kb on + strand, within PfGW456L13_3153 at 3531.414 kb on + strand, within PfGW456L13_3153 at 3531.414 kb on + strand, within PfGW456L13_3153 at 3531.414 kb on + strand, within PfGW456L13_3153 at 3531.414 kb on + strand, within PfGW456L13_3153 at 3531.414 kb on + strand, within PfGW456L13_3153 at 3531.415 kb on - strand at 3531.415 kb on - strand, within PfGW456L13_3153 at 3531.418 kb on + strand, within PfGW456L13_3153 at 3531.419 kb on - strand, within PfGW456L13_3153 at 3531.419 kb on - strand, within PfGW456L13_3153 at 3531.419 kb on - strand, within PfGW456L13_3153 at 3531.419 kb on - strand, within PfGW456L13_3153 at 3531.482 kb on + strand, within PfGW456L13_3153 at 3531.483 kb on - strand, within PfGW456L13_3153 at 3531.483 kb on - strand, within PfGW456L13_3153 at 3531.535 kb on + strand at 3531.536 kb on - strand at 3531.553 kb on - strand at 3531.606 kb on + strand at 3531.702 kb on + strand, within PfGW456L13_3154 at 3531.702 kb on + strand, within PfGW456L13_3154 at 3531.702 kb on + strand, within PfGW456L13_3154 at 3531.703 kb on - strand, within PfGW456L13_3154 at 3531.762 kb on - strand, within PfGW456L13_3154 at 3531.762 kb on - strand, within PfGW456L13_3154 at 3531.762 kb on - strand, within PfGW456L13_3154 at 3531.936 kb on + strand, within PfGW456L13_3154 at 3531.937 kb on - strand, within PfGW456L13_3154 at 3531.937 kb on - strand at 3531.937 kb on - strand, within PfGW456L13_3154 at 3531.937 kb on - strand, within PfGW456L13_3154 at 3531.948 kb on + strand, within PfGW456L13_3154 at 3531.949 kb on - strand, within PfGW456L13_3154 at 3532.148 kb on + strand at 3532.167 kb on + strand at 3532.167 kb on + strand at 3532.271 kb on + strand at 3532.271 kb on + strand at 3532.271 kb on + strand at 3532.271 kb on + strand at 3532.271 kb on + strand at 3532.271 kb on + strand at 3532.272 kb on - strand at 3532.272 kb on - strand at 3532.272 kb on - strand at 3532.272 kb on - strand at 3532.330 kb on + strand at 3532.330 kb on + strand at 3532.331 kb on - strand at 3532.331 kb on - strand at 3532.331 kb on - strand at 3532.331 kb on - strand at 3532.331 kb on - strand at 3532.331 kb on - strand at 3532.369 kb on + strand at 3532.369 kb on + strand at 3532.369 kb on + strand at 3532.369 kb on + strand at 3532.369 kb on + strand at 3532.457 kb on + strand at 3532.457 kb on + strand at 3532.457 kb on + strand at 3532.458 kb on - strand at 3532.458 kb on - strand at 3532.682 kb on + strand, within PfGW456L13_3155 at 3532.682 kb on + strand, within PfGW456L13_3155 at 3532.683 kb on - strand, within PfGW456L13_3155 at 3532.683 kb on - strand, within PfGW456L13_3155 at 3532.683 kb on - strand, within PfGW456L13_3155 at 3532.683 kb on - strand at 3532.760 kb on + strand, within PfGW456L13_3155 at 3532.779 kb on - strand, within PfGW456L13_3155 at 3532.818 kb on - strand, within PfGW456L13_3155 at 3532.974 kb on - strand, within PfGW456L13_3155
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,530,651 + PfGW456L13_3152 0.62 -0.7 3,530,651 + PfGW456L13_3152 0.62 +0.1 3,530,652 - PfGW456L13_3152 0.62 +0.3 3,530,661 + PfGW456L13_3152 0.63 -0.3 3,530,662 - PfGW456L13_3152 0.63 -0.4 3,530,751 + +1.1 3,530,751 + PfGW456L13_3152 0.76 -0.8 3,530,751 + PfGW456L13_3152 0.76 -0.9 3,530,751 + PfGW456L13_3152 0.76 -1.0 3,530,752 - PfGW456L13_3152 0.76 +0.2 3,530,752 - PfGW456L13_3152 0.76 +1.1 3,530,752 - PfGW456L13_3152 0.76 -0.1 3,530,778 - PfGW456L13_3152 0.80 +0.2 3,530,778 - PfGW456L13_3152 0.80 -0.1 3,530,778 - PfGW456L13_3152 0.80 -0.7 3,530,889 + +1.5 3,531,119 + -0.0 3,531,254 + +1.3 3,531,255 - +0.4 3,531,323 + -1.3 3,531,323 + -0.5 3,531,406 + +0.1 3,531,407 - PfGW456L13_3153 0.41 +1.2 3,531,414 + PfGW456L13_3153 0.45 -0.8 3,531,414 + PfGW456L13_3153 0.45 +0.6 3,531,414 + PfGW456L13_3153 0.45 -0.3 3,531,414 + PfGW456L13_3153 0.45 +0.5 3,531,414 + PfGW456L13_3153 0.45 +0.5 3,531,414 + PfGW456L13_3153 0.45 +1.2 3,531,414 + PfGW456L13_3153 0.45 +0.8 3,531,414 + PfGW456L13_3153 0.45 -0.7 3,531,415 - -0.8 3,531,415 - PfGW456L13_3153 0.46 +0.5 3,531,418 + PfGW456L13_3153 0.48 +0.8 3,531,419 - PfGW456L13_3153 0.48 +0.4 3,531,419 - PfGW456L13_3153 0.48 -2.5 3,531,419 - PfGW456L13_3153 0.48 -0.2 3,531,419 - PfGW456L13_3153 0.48 -0.1 3,531,482 + PfGW456L13_3153 0.87 +0.5 3,531,483 - PfGW456L13_3153 0.88 +0.4 3,531,483 - PfGW456L13_3153 0.88 +1.1 3,531,535 + +0.5 3,531,536 - +0.3 3,531,553 - -0.5 3,531,606 + -0.2 3,531,702 + PfGW456L13_3154 0.27 -0.2 3,531,702 + PfGW456L13_3154 0.27 +1.5 3,531,702 + PfGW456L13_3154 0.27 -0.8 3,531,703 - PfGW456L13_3154 0.27 +0.4 3,531,762 - PfGW456L13_3154 0.38 +0.7 3,531,762 - PfGW456L13_3154 0.38 -1.5 3,531,762 - PfGW456L13_3154 0.38 -0.7 3,531,936 + PfGW456L13_3154 0.71 -0.5 3,531,937 - PfGW456L13_3154 0.71 -0.5 3,531,937 - +0.5 3,531,937 - PfGW456L13_3154 0.71 -0.2 3,531,937 - PfGW456L13_3154 0.71 -0.2 3,531,948 + PfGW456L13_3154 0.73 +1.2 3,531,949 - PfGW456L13_3154 0.73 +0.4 3,532,148 + +0.0 3,532,167 + +0.6 3,532,167 + +1.5 3,532,271 + -0.1 3,532,271 + -0.7 3,532,271 + -1.0 3,532,271 + +0.3 3,532,271 + +0.4 3,532,271 + +1.0 3,532,272 - -0.4 3,532,272 - +0.8 3,532,272 - +0.2 3,532,272 - +0.5 3,532,330 + -0.1 3,532,330 + +0.7 3,532,331 - +0.2 3,532,331 - +0.5 3,532,331 - -0.4 3,532,331 - +0.8 3,532,331 - -0.3 3,532,331 - -0.4 3,532,369 + -0.9 3,532,369 + +0.2 3,532,369 + -0.1 3,532,369 + +0.2 3,532,369 + -0.0 3,532,457 + +0.2 3,532,457 + +2.1 3,532,457 + +0.4 3,532,458 - -0.3 3,532,458 - -0.9 3,532,682 + PfGW456L13_3155 0.22 -1.8 3,532,682 + PfGW456L13_3155 0.22 -0.4 3,532,683 - PfGW456L13_3155 0.22 -0.3 3,532,683 - PfGW456L13_3155 0.22 -0.7 3,532,683 - PfGW456L13_3155 0.22 -1.1 3,532,683 - -1.1 3,532,760 + PfGW456L13_3155 0.28 -0.2 3,532,779 - PfGW456L13_3155 0.29 -0.1 3,532,818 - PfGW456L13_3155 0.32 +1.3 3,532,974 - PfGW456L13_3155 0.44 +0.7
Or see this region's nucleotide sequence