Strain Fitness in Pseudomonas sp. S08-1 around OH686_10480

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_10475 and OH686_10480 are separated by 87 nucleotidesOH686_10480 and OH686_10485 overlap by 1 nucleotides OH686_10475: OH686_10475 - Nitronate monooxygenase , at 2,148,565 to 2,149,626 _10475 OH686_10480: OH686_10480 - Transcriptional regulator, LysR family, at 2,149,714 to 2,150,589 _10480 OH686_10485: OH686_10485 - Uncharacterized MFS-type transporter, at 2,150,589 to 2,151,731 _10485 Position (kb) 2149 2150 2151Strain fitness (log2 ratio) -2 -1 0 1 2at 2148.716 kb on + strand, within OH686_10475at 2148.716 kb on + strand, within OH686_10475at 2148.716 kb on + strand, within OH686_10475at 2148.716 kb on + strand, within OH686_10475at 2148.716 kb on + strand, within OH686_10475at 2148.716 kb on + strand, within OH686_10475at 2148.716 kb on + strand, within OH686_10475at 2148.716 kb on + strand, within OH686_10475at 2148.716 kb on + strand, within OH686_10475at 2148.716 kb on + strand, within OH686_10475at 2148.717 kb on - strand, within OH686_10475at 2148.717 kb on - strand, within OH686_10475at 2148.717 kb on - strand, within OH686_10475at 2148.717 kb on - strand, within OH686_10475at 2148.717 kb on - strand, within OH686_10475at 2148.717 kb on - strand, within OH686_10475at 2148.717 kb on - strand, within OH686_10475at 2148.717 kb on - strand, within OH686_10475at 2148.717 kb on - strand, within OH686_10475at 2148.717 kb on - strand, within OH686_10475at 2148.722 kb on + strand, within OH686_10475at 2148.722 kb on + strand, within OH686_10475at 2148.722 kb on + strand, within OH686_10475at 2148.722 kb on + strand, within OH686_10475at 2148.722 kb on + strand, within OH686_10475at 2148.722 kb on + strand, within OH686_10475at 2148.722 kb on + strand, within OH686_10475at 2148.722 kb on + strand, within OH686_10475at 2148.722 kb on + strand, within OH686_10475at 2148.722 kb on + strand, within OH686_10475at 2148.723 kb on - strand, within OH686_10475at 2148.723 kb on - strand, within OH686_10475at 2148.723 kb on - strand, within OH686_10475at 2148.723 kb on - strand, within OH686_10475at 2148.723 kb on - strand, within OH686_10475at 2148.863 kb on + strand, within OH686_10475at 2148.864 kb on - strand, within OH686_10475at 2148.916 kb on + strand, within OH686_10475at 2148.916 kb on + strand, within OH686_10475at 2148.917 kb on - strand, within OH686_10475at 2148.917 kb on - strand, within OH686_10475at 2148.917 kb on - strand, within OH686_10475at 2149.298 kb on + strand, within OH686_10475at 2149.298 kb on + strand, within OH686_10475at 2149.298 kb on + strand, within OH686_10475at 2149.298 kb on + strand, within OH686_10475at 2149.298 kb on + strand, within OH686_10475at 2149.298 kb on + strand, within OH686_10475at 2149.299 kb on - strand, within OH686_10475at 2149.299 kb on - strand, within OH686_10475at 2149.299 kb on - strand, within OH686_10475at 2149.299 kb on - strand, within OH686_10475at 2149.299 kb on - strand, within OH686_10475at 2149.299 kb on - strand, within OH686_10475at 2149.685 kb on + strandat 2149.870 kb on - strand, within OH686_10480at 2149.912 kb on + strand, within OH686_10480at 2149.999 kb on - strand, within OH686_10480at 2150.326 kb on + strand, within OH686_10480at 2150.327 kb on - strand, within OH686_10480at 2150.327 kb on - strand, within OH686_10480at 2150.396 kb on - strand, within OH686_10480at 2150.396 kb on - strand, within OH686_10480at 2150.739 kb on + strand, within OH686_10485at 2150.739 kb on + strand, within OH686_10485at 2150.739 kb on + strand, within OH686_10485at 2150.740 kb on - strand, within OH686_10485at 2150.740 kb on - strand, within OH686_10485at 2150.740 kb on - strand, within OH686_10485at 2150.740 kb on - strand, within OH686_10485at 2150.748 kb on + strand, within OH686_10485at 2150.749 kb on - strand, within OH686_10485at 2151.002 kb on + strand, within OH686_10485at 2151.210 kb on + strand, within OH686_10485at 2151.210 kb on + strand, within OH686_10485at 2151.210 kb on + strand, within OH686_10485at 2151.211 kb on - strand, within OH686_10485at 2151.211 kb on - strand, within OH686_10485at 2151.211 kb on - strand, within OH686_10485at 2151.211 kb on - strand, within OH686_10485at 2151.211 kb on - strand, within OH686_10485at 2151.211 kb on - strand, within OH686_10485at 2151.211 kb on - strand, within OH686_10485at 2151.211 kb on - strand, within OH686_10485at 2151.211 kb on - strand, within OH686_10485at 2151.211 kb on - strand, within OH686_10485at 2151.211 kb on - strand, within OH686_10485at 2151.231 kb on + strand, within OH686_10485at 2151.231 kb on + strand, within OH686_10485at 2151.231 kb on + strand, within OH686_10485at 2151.232 kb on - strand, within OH686_10485at 2151.232 kb on - strand, within OH686_10485at 2151.232 kb on - strand, within OH686_10485at 2151.232 kb on - strand, within OH686_10485at 2151.232 kb on - strand, within OH686_10485at 2151.232 kb on - strand, within OH686_10485at 2151.232 kb on - strand, within OH686_10485at 2151.232 kb on - strand, within OH686_10485at 2151.232 kb on - strand, within OH686_10485at 2151.249 kb on + strand, within OH686_10485at 2151.249 kb on + strand, within OH686_10485at 2151.249 kb on + strand, within OH686_10485at 2151.249 kb on + strand, within OH686_10485at 2151.249 kb on + strand, within OH686_10485at 2151.249 kb on + strand, within OH686_10485at 2151.249 kb on + strand, within OH686_10485at 2151.250 kb on - strand, within OH686_10485at 2151.250 kb on - strand, within OH686_10485at 2151.250 kb on - strand, within OH686_10485at 2151.250 kb on - strand, within OH686_10485at 2151.250 kb on - strand, within OH686_10485at 2151.250 kb on - strand, within OH686_10485at 2151.250 kb on - strand, within OH686_10485at 2151.250 kb on - strand, within OH686_10485at 2151.577 kb on - strand, within OH686_10485

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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2,148,716 + OH686_10475 0.14 -0.2
2,148,716 + OH686_10475 0.14 +0.6
2,148,716 + OH686_10475 0.14 -0.3
2,148,716 + OH686_10475 0.14 -1.4
2,148,716 + OH686_10475 0.14 -0.5
2,148,716 + OH686_10475 0.14 +0.6
2,148,716 + OH686_10475 0.14 -0.5
2,148,716 + OH686_10475 0.14 +0.7
2,148,716 + OH686_10475 0.14 -0.7
2,148,716 + OH686_10475 0.14 +0.9
2,148,717 - OH686_10475 0.14 -0.2
2,148,717 - OH686_10475 0.14 +0.1
2,148,717 - OH686_10475 0.14 +0.4
2,148,717 - OH686_10475 0.14 -0.1
2,148,717 - OH686_10475 0.14 +0.6
2,148,717 - OH686_10475 0.14 +1.0
2,148,717 - OH686_10475 0.14 +0.2
2,148,717 - OH686_10475 0.14 -0.7
2,148,717 - OH686_10475 0.14 +0.9
2,148,717 - OH686_10475 0.14 -1.3
2,148,722 + OH686_10475 0.15 +0.8
2,148,722 + OH686_10475 0.15 +0.2
2,148,722 + OH686_10475 0.15 -0.3
2,148,722 + OH686_10475 0.15 -0.1
2,148,722 + OH686_10475 0.15 +0.4
2,148,722 + OH686_10475 0.15 +0.6
2,148,722 + OH686_10475 0.15 -1.5
2,148,722 + OH686_10475 0.15 -0.8
2,148,722 + OH686_10475 0.15 -0.8
2,148,722 + OH686_10475 0.15 +0.4
2,148,723 - OH686_10475 0.15 +0.9
2,148,723 - OH686_10475 0.15 +2.3
2,148,723 - OH686_10475 0.15 +0.2
2,148,723 - OH686_10475 0.15 +0.3
2,148,723 - OH686_10475 0.15 -0.3
2,148,863 + OH686_10475 0.28 +0.4
2,148,864 - OH686_10475 0.28 -0.0
2,148,916 + OH686_10475 0.33 -0.8
2,148,916 + OH686_10475 0.33 -0.3
2,148,917 - OH686_10475 0.33 +0.6
2,148,917 - OH686_10475 0.33 +0.5
2,148,917 - OH686_10475 0.33 -0.2
2,149,298 + OH686_10475 0.69 +0.1
2,149,298 + OH686_10475 0.69 -0.4
2,149,298 + OH686_10475 0.69 +0.2
2,149,298 + OH686_10475 0.69 -0.7
2,149,298 + OH686_10475 0.69 -0.1
2,149,298 + OH686_10475 0.69 -0.9
2,149,299 - OH686_10475 0.69 +0.0
2,149,299 - OH686_10475 0.69 +0.7
2,149,299 - OH686_10475 0.69 +0.4
2,149,299 - OH686_10475 0.69 -0.6
2,149,299 - OH686_10475 0.69 -1.0
2,149,299 - OH686_10475 0.69 +0.3
2,149,685 + -0.9
2,149,870 - OH686_10480 0.18 -0.3
2,149,912 + OH686_10480 0.23 -0.4
2,149,999 - OH686_10480 0.33 -0.2
2,150,326 + OH686_10480 0.70 +0.3
2,150,327 - OH686_10480 0.70 -0.2
2,150,327 - OH686_10480 0.70 -0.7
2,150,396 - OH686_10480 0.78 -0.8
2,150,396 - OH686_10480 0.78 -0.1
2,150,739 + OH686_10485 0.13 -0.1
2,150,739 + OH686_10485 0.13 -1.0
2,150,739 + OH686_10485 0.13 +0.8
2,150,740 - OH686_10485 0.13 -0.8
2,150,740 - OH686_10485 0.13 -2.6
2,150,740 - OH686_10485 0.13 +0.7
2,150,740 - OH686_10485 0.13 -1.0
2,150,748 + OH686_10485 0.14 -0.3
2,150,749 - OH686_10485 0.14 +0.3
2,151,002 + OH686_10485 0.36 +1.0
2,151,210 + OH686_10485 0.54 -1.4
2,151,210 + OH686_10485 0.54 -1.4
2,151,210 + OH686_10485 0.54 +0.6
2,151,211 - OH686_10485 0.54 +0.1
2,151,211 - OH686_10485 0.54 -0.4
2,151,211 - OH686_10485 0.54 -0.6
2,151,211 - OH686_10485 0.54 +0.1
2,151,211 - OH686_10485 0.54 +0.7
2,151,211 - OH686_10485 0.54 -1.7
2,151,211 - OH686_10485 0.54 +0.6
2,151,211 - OH686_10485 0.54 +0.2
2,151,211 - OH686_10485 0.54 -0.0
2,151,211 - OH686_10485 0.54 +0.0
2,151,211 - OH686_10485 0.54 +0.2
2,151,231 + OH686_10485 0.56 -0.7
2,151,231 + OH686_10485 0.56 -2.3
2,151,231 + OH686_10485 0.56 +0.2
2,151,232 - OH686_10485 0.56 -0.3
2,151,232 - OH686_10485 0.56 +0.2
2,151,232 - OH686_10485 0.56 +0.4
2,151,232 - OH686_10485 0.56 +0.3
2,151,232 - OH686_10485 0.56 -0.5
2,151,232 - OH686_10485 0.56 -2.3
2,151,232 - OH686_10485 0.56 -0.5
2,151,232 - OH686_10485 0.56 +0.7
2,151,232 - OH686_10485 0.56 +0.3
2,151,249 + OH686_10485 0.58 -1.1
2,151,249 + OH686_10485 0.58 -0.3
2,151,249 + OH686_10485 0.58 -0.1
2,151,249 + OH686_10485 0.58 +0.2
2,151,249 + OH686_10485 0.58 -1.0
2,151,249 + OH686_10485 0.58 -0.3
2,151,249 + OH686_10485 0.58 +0.7
2,151,250 - OH686_10485 0.58 +1.1
2,151,250 - OH686_10485 0.58 -0.5
2,151,250 - OH686_10485 0.58 +1.2
2,151,250 - OH686_10485 0.58 +0.9
2,151,250 - OH686_10485 0.58 -0.8
2,151,250 - OH686_10485 0.58 -0.1
2,151,250 - OH686_10485 0.58 -0.7
2,151,250 - OH686_10485 0.58 -1.0
2,151,577 - OH686_10485 0.86 +0.8

Or see this region's nucleotide sequence