Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4465 and EX28DRAFT_4466 are separated by 67 nucleotides EX28DRAFT_4466 and EX28DRAFT_4467 are separated by 22 nucleotides EX28DRAFT_4467 and EX28DRAFT_4468 are separated by 46 nucleotides EX28DRAFT_4468 and EX28DRAFT_4469 are separated by 299 nucleotides EX28DRAFT_4469 and EX28DRAFT_4470 are separated by 5 nucleotides EX28DRAFT_4470 and EX28DRAFT_4471 are separated by 172 nucleotides
EX28DRAFT_4465: EX28DRAFT_4465 - tRNA, at 33,304 to 33,380
_4465
EX28DRAFT_4466: EX28DRAFT_4466 - tRNA, at 33,448 to 33,523
_4466
EX28DRAFT_4467: EX28DRAFT_4467 - tRNA, at 33,546 to 33,631
_4467
EX28DRAFT_4468: EX28DRAFT_4468 - tRNA, at 33,678 to 33,754
_4468
EX28DRAFT_4469: EX28DRAFT_4469 - RNA, at 34,054 to 34,256
_4469
EX28DRAFT_4470: EX28DRAFT_4470 - hypothetical protein, at 34,262 to 35,473
_4470
EX28DRAFT_4471: EX28DRAFT_4471 - heme biosynthesis-associated TPR protein, at 35,646 to 36,845
_4471
Position (kb) 34
35
36 Strain fitness (log2 ratio) -1
0
1 at 33.525 kb on + strand at 33.587 kb on + strand, within EX28DRAFT_4467 at 33.891 kb on - strand at 33.891 kb on - strand at 34.044 kb on + strand at 34.055 kb on + strand at 34.055 kb on + strand at 34.055 kb on + strand at 34.075 kb on + strand, within EX28DRAFT_4469 at 34.075 kb on + strand, within EX28DRAFT_4469 at 34.075 kb on + strand, within EX28DRAFT_4469 at 34.075 kb on + strand, within EX28DRAFT_4469 at 34.075 kb on + strand, within EX28DRAFT_4469 at 34.076 kb on - strand, within EX28DRAFT_4469 at 34.076 kb on - strand, within EX28DRAFT_4469 at 34.123 kb on + strand, within EX28DRAFT_4469 at 34.203 kb on + strand, within EX28DRAFT_4469 at 34.203 kb on + strand, within EX28DRAFT_4469 at 34.204 kb on - strand, within EX28DRAFT_4469 at 34.204 kb on - strand, within EX28DRAFT_4469 at 34.240 kb on - strand at 34.323 kb on + strand at 34.323 kb on + strand at 34.323 kb on + strand at 34.323 kb on + strand at 34.324 kb on - strand at 34.324 kb on - strand at 34.324 kb on - strand at 34.324 kb on - strand at 34.325 kb on + strand at 34.334 kb on + strand at 34.529 kb on + strand, within EX28DRAFT_4470 at 34.529 kb on + strand, within EX28DRAFT_4470 at 34.529 kb on + strand, within EX28DRAFT_4470 at 34.530 kb on - strand, within EX28DRAFT_4470 at 34.596 kb on - strand, within EX28DRAFT_4470 at 34.832 kb on + strand, within EX28DRAFT_4470 at 34.861 kb on + strand, within EX28DRAFT_4470 at 34.861 kb on + strand, within EX28DRAFT_4470 at 34.905 kb on - strand, within EX28DRAFT_4470 at 34.905 kb on - strand, within EX28DRAFT_4470 at 35.066 kb on - strand, within EX28DRAFT_4470 at 35.078 kb on - strand, within EX28DRAFT_4470 at 35.078 kb on - strand, within EX28DRAFT_4470 at 35.342 kb on + strand, within EX28DRAFT_4470 at 35.373 kb on - strand at 35.457 kb on + strand at 35.457 kb on + strand at 35.457 kb on + strand at 35.555 kb on + strand at 35.555 kb on + strand at 35.556 kb on - strand at 35.596 kb on + strand at 35.596 kb on + strand at 35.597 kb on - strand at 36.074 kb on + strand, within EX28DRAFT_4471 at 36.256 kb on + strand, within EX28DRAFT_4471 at 36.256 kb on + strand, within EX28DRAFT_4471 at 36.256 kb on + strand, within EX28DRAFT_4471 at 36.257 kb on - strand, within EX28DRAFT_4471
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 33,525 + +0.7 33,587 + EX28DRAFT_4467 0.48 +0.2 33,891 - +0.3 33,891 - -0.4 34,044 + -0.1 34,055 + +0.1 34,055 + -0.7 34,055 + -0.3 34,075 + EX28DRAFT_4469 0.10 +0.2 34,075 + EX28DRAFT_4469 0.10 +0.2 34,075 + EX28DRAFT_4469 0.10 -0.8 34,075 + EX28DRAFT_4469 0.10 -0.3 34,075 + EX28DRAFT_4469 0.10 -0.2 34,076 - EX28DRAFT_4469 0.11 +0.5 34,076 - EX28DRAFT_4469 0.11 -0.2 34,123 + EX28DRAFT_4469 0.34 -1.7 34,203 + EX28DRAFT_4469 0.73 +0.2 34,203 + EX28DRAFT_4469 0.73 +0.4 34,204 - EX28DRAFT_4469 0.74 +0.1 34,204 - EX28DRAFT_4469 0.74 +0.6 34,240 - -0.2 34,323 + -0.0 34,323 + +0.5 34,323 + +0.8 34,323 + +0.9 34,324 - -0.1 34,324 - +0.1 34,324 - +0.5 34,324 - +0.3 34,325 + +1.5 34,334 + +1.3 34,529 + EX28DRAFT_4470 0.22 +1.1 34,529 + EX28DRAFT_4470 0.22 +0.6 34,529 + EX28DRAFT_4470 0.22 +0.5 34,530 - EX28DRAFT_4470 0.22 +0.4 34,596 - EX28DRAFT_4470 0.28 +0.6 34,832 + EX28DRAFT_4470 0.47 +0.1 34,861 + EX28DRAFT_4470 0.49 +0.5 34,861 + EX28DRAFT_4470 0.49 -0.3 34,905 - EX28DRAFT_4470 0.53 +0.7 34,905 - EX28DRAFT_4470 0.53 -0.0 35,066 - EX28DRAFT_4470 0.66 +0.6 35,078 - EX28DRAFT_4470 0.67 +0.2 35,078 - EX28DRAFT_4470 0.67 +0.1 35,342 + EX28DRAFT_4470 0.89 +0.1 35,373 - +0.9 35,457 + +0.2 35,457 + -0.1 35,457 + -0.1 35,555 + +0.6 35,555 + +0.4 35,556 - +0.3 35,596 + -0.1 35,596 + +0.9 35,597 - +0.6 36,074 + EX28DRAFT_4471 0.36 +0.4 36,256 + EX28DRAFT_4471 0.51 -0.8 36,256 + EX28DRAFT_4471 0.51 -0.2 36,256 + EX28DRAFT_4471 0.51 -0.4 36,257 - EX28DRAFT_4471 0.51 -0.5
Or see this region's nucleotide sequence