Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4276 and EX28DRAFT_4277 are separated by 41 nucleotides EX28DRAFT_4277 and EX28DRAFT_4278 are separated by 149 nucleotides EX28DRAFT_4278 and EX28DRAFT_4279 are separated by 88 nucleotides
EX28DRAFT_4276: EX28DRAFT_4276 - Predicted dehydrogenases and related proteins, at 81,041 to 82,078
_4276
EX28DRAFT_4277: EX28DRAFT_4277 - RNA, at 82,120 to 82,185
_4277
EX28DRAFT_4278: EX28DRAFT_4278 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 82,335 to 82,823
_4278
EX28DRAFT_4279: EX28DRAFT_4279 - gamma-glutamyltranspeptidase, at 82,912 to 84,657
_4279
Position (kb) 82
83 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 81.370 kb on + strand, within EX28DRAFT_4276 at 81.472 kb on + strand, within EX28DRAFT_4276 at 81.472 kb on + strand, within EX28DRAFT_4276 at 81.473 kb on - strand, within EX28DRAFT_4276 at 81.495 kb on + strand, within EX28DRAFT_4276 at 81.496 kb on - strand, within EX28DRAFT_4276 at 81.496 kb on - strand, within EX28DRAFT_4276 at 81.544 kb on + strand, within EX28DRAFT_4276 at 81.544 kb on + strand, within EX28DRAFT_4276 at 81.545 kb on - strand, within EX28DRAFT_4276 at 81.545 kb on - strand, within EX28DRAFT_4276 at 81.937 kb on - strand, within EX28DRAFT_4276 at 82.018 kb on - strand at 82.018 kb on - strand at 82.058 kb on - strand at 82.071 kb on - strand at 82.071 kb on - strand at 82.135 kb on - strand, within EX28DRAFT_4277 at 82.150 kb on + strand, within EX28DRAFT_4277 at 82.150 kb on + strand, within EX28DRAFT_4277 at 82.151 kb on - strand, within EX28DRAFT_4277 at 82.153 kb on + strand, within EX28DRAFT_4277 at 82.330 kb on - strand at 82.345 kb on + strand at 82.345 kb on + strand at 82.414 kb on - strand, within EX28DRAFT_4278 at 82.414 kb on - strand, within EX28DRAFT_4278 at 82.508 kb on - strand, within EX28DRAFT_4278 at 82.650 kb on - strand, within EX28DRAFT_4278 at 82.725 kb on + strand, within EX28DRAFT_4278 at 82.726 kb on - strand, within EX28DRAFT_4278 at 82.789 kb on - strand at 82.792 kb on + strand at 82.792 kb on + strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.800 kb on + strand at 82.804 kb on - strand at 82.804 kb on - strand at 82.804 kb on - strand at 82.804 kb on - strand at 82.804 kb on - strand at 82.805 kb on + strand at 82.821 kb on + strand at 82.822 kb on - strand at 82.875 kb on + strand at 82.917 kb on - strand at 83.187 kb on + strand, within EX28DRAFT_4279 at 83.188 kb on - strand, within EX28DRAFT_4279 at 83.193 kb on + strand, within EX28DRAFT_4279 at 83.193 kb on + strand, within EX28DRAFT_4279 at 83.265 kb on + strand, within EX28DRAFT_4279 at 83.266 kb on - strand, within EX28DRAFT_4279 at 83.266 kb on - strand, within EX28DRAFT_4279 at 83.266 kb on - strand, within EX28DRAFT_4279 at 83.570 kb on + strand, within EX28DRAFT_4279 at 83.580 kb on - strand, within EX28DRAFT_4279 at 83.580 kb on - strand, within EX28DRAFT_4279
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 81,370 + EX28DRAFT_4276 0.32 -0.3 81,472 + EX28DRAFT_4276 0.42 -0.2 81,472 + EX28DRAFT_4276 0.42 -0.8 81,473 - EX28DRAFT_4276 0.42 +0.8 81,495 + EX28DRAFT_4276 0.44 -0.4 81,496 - EX28DRAFT_4276 0.44 +0.1 81,496 - EX28DRAFT_4276 0.44 -0.3 81,544 + EX28DRAFT_4276 0.48 -0.4 81,544 + EX28DRAFT_4276 0.48 -0.4 81,545 - EX28DRAFT_4276 0.49 +0.7 81,545 - EX28DRAFT_4276 0.49 -0.2 81,937 - EX28DRAFT_4276 0.86 -0.4 82,018 - -0.3 82,018 - +0.4 82,058 - -0.1 82,071 - -0.6 82,071 - -0.6 82,135 - EX28DRAFT_4277 0.23 -0.1 82,150 + EX28DRAFT_4277 0.45 -0.2 82,150 + EX28DRAFT_4277 0.45 +0.2 82,151 - EX28DRAFT_4277 0.47 -0.2 82,153 + EX28DRAFT_4277 0.50 -0.4 82,330 - -0.6 82,345 + -0.3 82,345 + -0.0 82,414 - EX28DRAFT_4278 0.16 -3.1 82,414 - EX28DRAFT_4278 0.16 +0.5 82,508 - EX28DRAFT_4278 0.35 +0.4 82,650 - EX28DRAFT_4278 0.64 -0.1 82,725 + EX28DRAFT_4278 0.80 +0.9 82,726 - EX28DRAFT_4278 0.80 +1.9 82,789 - +1.2 82,792 + -0.0 82,792 + +0.1 82,793 - +0.2 82,793 - +0.1 82,793 - -0.2 82,793 - -0.0 82,793 - +0.6 82,793 - -0.1 82,793 - +0.3 82,793 - +0.4 82,800 + +0.0 82,804 - +0.3 82,804 - -0.6 82,804 - -0.7 82,804 - -0.4 82,804 - -0.4 82,805 + +0.3 82,821 + -0.6 82,822 - -0.2 82,875 + +0.1 82,917 - +1.3 83,187 + EX28DRAFT_4279 0.16 +0.5 83,188 - EX28DRAFT_4279 0.16 -0.6 83,193 + EX28DRAFT_4279 0.16 -0.4 83,193 + EX28DRAFT_4279 0.16 +0.3 83,265 + EX28DRAFT_4279 0.20 -0.1 83,266 - EX28DRAFT_4279 0.20 -0.6 83,266 - EX28DRAFT_4279 0.20 +0.8 83,266 - EX28DRAFT_4279 0.20 -0.4 83,570 + EX28DRAFT_4279 0.38 +0.3 83,580 - EX28DRAFT_4279 0.38 +0.7 83,580 - EX28DRAFT_4279 0.38 -0.2
Or see this region's nucleotide sequence