Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4181 and EX28DRAFT_4182 are separated by 51 nucleotides EX28DRAFT_4182 and EX28DRAFT_4183 are separated by 238 nucleotides EX28DRAFT_4183 and EX28DRAFT_4184 are separated by 166 nucleotides EX28DRAFT_4184 and EX28DRAFT_4185 overlap by 1 nucleotides
EX28DRAFT_4181: EX28DRAFT_4181 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 164,667 to 165,257
_4181
EX28DRAFT_4182: EX28DRAFT_4182 - Uncharacterized protein conserved in bacteria, at 165,309 to 165,527
_4182
EX28DRAFT_4183: EX28DRAFT_4183 - FKBP-type peptidyl-prolyl cis-trans isomerases 1, at 165,766 to 166,572
_4183
EX28DRAFT_4184: EX28DRAFT_4184 - Uncharacterized protein conserved in bacteria, at 166,739 to 167,461
_4184
EX28DRAFT_4185: EX28DRAFT_4185 - sulfur relay protein TusD/DsrE, at 167,461 to 167,847
_4185
Position (kb) 165
166
167 Strain fitness (log2 ratio) -2
-1
0
1 at 164.766 kb on + strand, within EX28DRAFT_4181 at 165.256 kb on - strand at 165.448 kb on - strand, within EX28DRAFT_4182 at 165.510 kb on + strand at 165.510 kb on + strand at 165.510 kb on + strand at 165.511 kb on - strand at 165.511 kb on - strand at 165.518 kb on + strand at 165.630 kb on + strand at 165.703 kb on + strand at 165.705 kb on + strand at 165.708 kb on + strand at 165.708 kb on + strand at 165.708 kb on + strand at 165.709 kb on - strand at 165.709 kb on - strand at 165.712 kb on + strand at 165.712 kb on + strand at 165.721 kb on + strand at 165.721 kb on + strand at 165.762 kb on - strand at 165.785 kb on + strand at 166.035 kb on + strand, within EX28DRAFT_4183 at 166.217 kb on - strand, within EX28DRAFT_4183 at 166.288 kb on - strand, within EX28DRAFT_4183 at 166.288 kb on - strand, within EX28DRAFT_4183 at 166.571 kb on - strand at 166.613 kb on - strand at 166.626 kb on + strand at 166.626 kb on + strand at 166.627 kb on - strand at 166.628 kb on + strand at 166.628 kb on + strand at 166.629 kb on - strand at 166.632 kb on + strand at 166.633 kb on - strand at 166.662 kb on + strand at 166.667 kb on + strand at 166.667 kb on + strand at 166.679 kb on + strand at 166.679 kb on + strand at 166.683 kb on + strand at 166.683 kb on + strand at 167.330 kb on + strand, within EX28DRAFT_4184 at 167.408 kb on + strand at 167.414 kb on + strand at 167.416 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 164,766 + EX28DRAFT_4181 0.17 -0.3 165,256 - +0.1 165,448 - EX28DRAFT_4182 0.63 +0.2 165,510 + -1.9 165,510 + +0.2 165,510 + +0.0 165,511 - +0.2 165,511 - +0.7 165,518 + +0.5 165,630 + +0.1 165,703 + +0.5 165,705 + +0.4 165,708 + +0.1 165,708 + -0.1 165,708 + +0.6 165,709 - +0.0 165,709 - +0.1 165,712 + +0.7 165,712 + +0.7 165,721 + +0.0 165,721 + +0.5 165,762 - +0.3 165,785 + -1.3 166,035 + EX28DRAFT_4183 0.33 -0.0 166,217 - EX28DRAFT_4183 0.56 +1.0 166,288 - EX28DRAFT_4183 0.65 +1.5 166,288 - EX28DRAFT_4183 0.65 +0.1 166,571 - -0.1 166,613 - +0.0 166,626 + +1.7 166,626 + +0.4 166,627 - +0.8 166,628 + -0.4 166,628 + -0.5 166,629 - +0.3 166,632 + +1.1 166,633 - +0.4 166,662 + -0.3 166,667 + +0.5 166,667 + +0.1 166,679 + +1.6 166,679 + -0.7 166,683 + +0.1 166,683 + +0.6 167,330 + EX28DRAFT_4184 0.82 +0.0 167,408 + -0.5 167,414 + -1.1 167,416 + +0.1
Or see this region's nucleotide sequence