Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4013 and EX28DRAFT_4014 are separated by 49 nucleotides EX28DRAFT_4014 and EX28DRAFT_4015 are separated by 8 nucleotides EX28DRAFT_4015 and EX28DRAFT_4016 are separated by 616 nucleotides
EX28DRAFT_4013: EX28DRAFT_4013 - ATP synthase, F0 subunit c, at 223,574 to 223,813
_4013
EX28DRAFT_4014: EX28DRAFT_4014 - F0F1-type ATP synthase, subunit a, at 223,863 to 224,678
_4014
EX28DRAFT_4015: EX28DRAFT_4015 - F0F1-type ATP synthase, subunit I, at 224,687 to 225,067
_4015
EX28DRAFT_4016: EX28DRAFT_4016 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 225,684 to 226,307
_4016
Position (kb) 224
225
226 Strain fitness (log2 ratio) -1
0
1
2 at 224.825 kb on - strand, within EX28DRAFT_4015 at 224.876 kb on - strand, within EX28DRAFT_4015 at 225.047 kb on - strand at 225.097 kb on - strand at 225.097 kb on - strand at 225.113 kb on - strand at 225.161 kb on - strand at 225.195 kb on - strand at 225.217 kb on + strand at 225.351 kb on + strand at 225.351 kb on + strand at 225.352 kb on - strand at 225.352 kb on - strand at 225.352 kb on - strand at 225.453 kb on - strand at 225.468 kb on - strand at 225.701 kb on + strand at 225.702 kb on - strand at 225.705 kb on + strand at 225.744 kb on + strand at 225.744 kb on + strand at 225.854 kb on + strand, within EX28DRAFT_4016 at 225.855 kb on - strand, within EX28DRAFT_4016 at 225.985 kb on - strand, within EX28DRAFT_4016
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 224,825 - EX28DRAFT_4015 0.36 +2.4 224,876 - EX28DRAFT_4015 0.50 +1.9 225,047 - +1.9 225,097 - +0.9 225,097 - +1.6 225,113 - +1.3 225,161 - +0.9 225,195 - -0.8 225,217 + -0.8 225,351 + -1.0 225,351 + -1.5 225,352 - -1.7 225,352 - -1.4 225,352 - -0.2 225,453 - -1.0 225,468 - -0.9 225,701 + +0.7 225,702 - -1.2 225,705 + +0.9 225,744 + +1.1 225,744 + +0.9 225,854 + EX28DRAFT_4016 0.27 +1.2 225,855 - EX28DRAFT_4016 0.27 -0.0 225,985 - EX28DRAFT_4016 0.48 -0.9
Or see this region's nucleotide sequence