Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3864 and EX28DRAFT_3865 are separated by 21 nucleotides EX28DRAFT_3865 and EX28DRAFT_3866 are separated by 3 nucleotides
EX28DRAFT_3864: EX28DRAFT_3864 - Membrane-bound metallopeptidase, at 73,143 to 74,426
_3864
EX28DRAFT_3865: EX28DRAFT_3865 - Uncharacterized protein conserved in bacteria, at 74,448 to 75,362
_3865
EX28DRAFT_3866: EX28DRAFT_3866 - Glycosyltransferases involved in cell wall biogenesis, at 75,366 to 76,166
_3866
Position (kb) 74
75
76 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 73.617 kb on + strand, within EX28DRAFT_3864 at 73.626 kb on + strand, within EX28DRAFT_3864 at 73.653 kb on - strand, within EX28DRAFT_3864 at 74.119 kb on + strand, within EX28DRAFT_3864 at 74.120 kb on - strand, within EX28DRAFT_3864 at 74.120 kb on - strand, within EX28DRAFT_3864 at 74.268 kb on + strand, within EX28DRAFT_3864 at 74.424 kb on + strand at 74.491 kb on + strand at 74.492 kb on - strand at 74.493 kb on + strand at 74.493 kb on + strand at 74.493 kb on + strand at 74.494 kb on - strand at 74.494 kb on - strand at 74.494 kb on - strand at 74.760 kb on + strand, within EX28DRAFT_3865 at 74.761 kb on - strand, within EX28DRAFT_3865 at 74.799 kb on - strand, within EX28DRAFT_3865 at 74.945 kb on + strand, within EX28DRAFT_3865 at 75.003 kb on - strand, within EX28DRAFT_3865 at 75.168 kb on - strand, within EX28DRAFT_3865 at 75.239 kb on + strand, within EX28DRAFT_3865 at 75.240 kb on - strand, within EX28DRAFT_3865 at 75.262 kb on - strand, within EX28DRAFT_3865 at 75.262 kb on - strand, within EX28DRAFT_3865 at 75.303 kb on - strand at 75.308 kb on + strand at 75.308 kb on + strand at 75.321 kb on + strand at 75.321 kb on + strand at 75.322 kb on - strand at 75.446 kb on - strand, within EX28DRAFT_3866 at 75.458 kb on + strand, within EX28DRAFT_3866 at 75.460 kb on + strand, within EX28DRAFT_3866 at 75.460 kb on + strand, within EX28DRAFT_3866 at 75.612 kb on - strand, within EX28DRAFT_3866 at 75.612 kb on - strand, within EX28DRAFT_3866 at 75.656 kb on + strand, within EX28DRAFT_3866 at 75.657 kb on - strand, within EX28DRAFT_3866 at 75.666 kb on + strand, within EX28DRAFT_3866 at 75.667 kb on - strand, within EX28DRAFT_3866 at 75.667 kb on - strand, within EX28DRAFT_3866 at 75.731 kb on + strand, within EX28DRAFT_3866 at 75.791 kb on - strand, within EX28DRAFT_3866 at 75.835 kb on - strand, within EX28DRAFT_3866 at 75.882 kb on + strand, within EX28DRAFT_3866 at 75.913 kb on - strand, within EX28DRAFT_3866 at 76.004 kb on - strand, within EX28DRAFT_3866 at 76.207 kb on - strand at 76.209 kb on + strand at 76.210 kb on - strand at 76.257 kb on + strand at 76.315 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 73,617 + EX28DRAFT_3864 0.37 -2.8 73,626 + EX28DRAFT_3864 0.38 -2.5 73,653 - EX28DRAFT_3864 0.40 -1.6 74,119 + EX28DRAFT_3864 0.76 -1.1 74,120 - EX28DRAFT_3864 0.76 -1.2 74,120 - EX28DRAFT_3864 0.76 -1.0 74,268 + EX28DRAFT_3864 0.88 -1.1 74,424 + -0.1 74,491 + +0.2 74,492 - -0.7 74,493 + -0.1 74,493 + +0.8 74,493 + +0.9 74,494 - +0.6 74,494 - +0.8 74,494 - -0.0 74,760 + EX28DRAFT_3865 0.34 +0.0 74,761 - EX28DRAFT_3865 0.34 -0.0 74,799 - EX28DRAFT_3865 0.38 -1.5 74,945 + EX28DRAFT_3865 0.54 -0.7 75,003 - EX28DRAFT_3865 0.61 -0.5 75,168 - EX28DRAFT_3865 0.79 +0.2 75,239 + EX28DRAFT_3865 0.86 +0.4 75,240 - EX28DRAFT_3865 0.87 -0.4 75,262 - EX28DRAFT_3865 0.89 +0.2 75,262 - EX28DRAFT_3865 0.89 -1.7 75,303 - +0.1 75,308 + +0.9 75,308 + -0.2 75,321 + +0.3 75,321 + -0.3 75,322 - -0.1 75,446 - EX28DRAFT_3866 0.10 -2.3 75,458 + EX28DRAFT_3866 0.11 +0.0 75,460 + EX28DRAFT_3866 0.12 -0.8 75,460 + EX28DRAFT_3866 0.12 +0.2 75,612 - EX28DRAFT_3866 0.31 +0.1 75,612 - EX28DRAFT_3866 0.31 +0.4 75,656 + EX28DRAFT_3866 0.36 -0.3 75,657 - EX28DRAFT_3866 0.36 +0.3 75,666 + EX28DRAFT_3866 0.37 +0.1 75,667 - EX28DRAFT_3866 0.38 +0.7 75,667 - EX28DRAFT_3866 0.38 -0.7 75,731 + EX28DRAFT_3866 0.46 -0.6 75,791 - EX28DRAFT_3866 0.53 -0.1 75,835 - EX28DRAFT_3866 0.59 -0.5 75,882 + EX28DRAFT_3866 0.64 +0.0 75,913 - EX28DRAFT_3866 0.68 -0.3 76,004 - EX28DRAFT_3866 0.80 -0.7 76,207 - -0.4 76,209 + +0.0 76,210 - +0.2 76,257 + +0.5 76,315 + +0.0
Or see this region's nucleotide sequence