Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3863 and EX28DRAFT_3864 are separated by 9 nucleotides EX28DRAFT_3864 and EX28DRAFT_3865 are separated by 21 nucleotides EX28DRAFT_3865 and EX28DRAFT_3866 are separated by 3 nucleotides
EX28DRAFT_3863: EX28DRAFT_3863 - phosphoglycerate mutase (EC 5.4.2.1), at 71,562 to 73,133
_3863
EX28DRAFT_3864: EX28DRAFT_3864 - Membrane-bound metallopeptidase, at 73,143 to 74,426
_3864
EX28DRAFT_3865: EX28DRAFT_3865 - Uncharacterized protein conserved in bacteria, at 74,448 to 75,362
_3865
EX28DRAFT_3866: EX28DRAFT_3866 - Glycosyltransferases involved in cell wall biogenesis, at 75,366 to 76,166
_3866
Position (kb) 73
74
75 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 72.151 kb on - strand, within EX28DRAFT_3863 at 72.153 kb on + strand, within EX28DRAFT_3863 at 72.153 kb on + strand, within EX28DRAFT_3863 at 72.199 kb on - strand, within EX28DRAFT_3863 at 72.199 kb on - strand, within EX28DRAFT_3863 at 72.267 kb on + strand, within EX28DRAFT_3863 at 72.268 kb on - strand, within EX28DRAFT_3863 at 72.268 kb on - strand, within EX28DRAFT_3863 at 72.578 kb on + strand, within EX28DRAFT_3863 at 72.691 kb on - strand, within EX28DRAFT_3863 at 72.759 kb on - strand, within EX28DRAFT_3863 at 72.779 kb on + strand, within EX28DRAFT_3863 at 72.780 kb on - strand, within EX28DRAFT_3863 at 72.842 kb on - strand, within EX28DRAFT_3863 at 72.842 kb on - strand, within EX28DRAFT_3863 at 72.842 kb on - strand, within EX28DRAFT_3863 at 73.002 kb on + strand at 73.002 kb on + strand at 73.003 kb on - strand at 73.014 kb on - strand at 73.082 kb on + strand at 73.109 kb on + strand at 73.241 kb on - strand at 73.371 kb on - strand, within EX28DRAFT_3864 at 73.446 kb on - strand, within EX28DRAFT_3864 at 73.617 kb on + strand, within EX28DRAFT_3864 at 73.626 kb on + strand, within EX28DRAFT_3864 at 73.653 kb on - strand, within EX28DRAFT_3864 at 74.119 kb on + strand, within EX28DRAFT_3864 at 74.120 kb on - strand, within EX28DRAFT_3864 at 74.120 kb on - strand, within EX28DRAFT_3864 at 74.268 kb on + strand, within EX28DRAFT_3864 at 74.424 kb on + strand at 74.491 kb on + strand at 74.492 kb on - strand at 74.493 kb on + strand at 74.493 kb on + strand at 74.493 kb on + strand at 74.494 kb on - strand at 74.494 kb on - strand at 74.494 kb on - strand at 74.760 kb on + strand, within EX28DRAFT_3865 at 74.761 kb on - strand, within EX28DRAFT_3865 at 74.799 kb on - strand, within EX28DRAFT_3865 at 74.945 kb on + strand, within EX28DRAFT_3865 at 75.003 kb on - strand, within EX28DRAFT_3865 at 75.168 kb on - strand, within EX28DRAFT_3865 at 75.239 kb on + strand, within EX28DRAFT_3865 at 75.240 kb on - strand, within EX28DRAFT_3865 at 75.262 kb on - strand, within EX28DRAFT_3865 at 75.262 kb on - strand, within EX28DRAFT_3865 at 75.303 kb on - strand at 75.308 kb on + strand at 75.308 kb on + strand at 75.321 kb on + strand at 75.321 kb on + strand at 75.322 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 72,151 - EX28DRAFT_3863 0.37 -0.0 72,153 + EX28DRAFT_3863 0.38 +0.6 72,153 + EX28DRAFT_3863 0.38 +0.0 72,199 - EX28DRAFT_3863 0.41 +0.3 72,199 - EX28DRAFT_3863 0.41 -1.1 72,267 + EX28DRAFT_3863 0.45 +0.3 72,268 - EX28DRAFT_3863 0.45 -2.0 72,268 - EX28DRAFT_3863 0.45 +0.2 72,578 + EX28DRAFT_3863 0.65 -0.3 72,691 - EX28DRAFT_3863 0.72 -0.5 72,759 - EX28DRAFT_3863 0.76 +0.1 72,779 + EX28DRAFT_3863 0.77 +0.1 72,780 - EX28DRAFT_3863 0.77 -1.0 72,842 - EX28DRAFT_3863 0.81 -1.3 72,842 - EX28DRAFT_3863 0.81 -1.5 72,842 - EX28DRAFT_3863 0.81 -0.0 73,002 + +0.1 73,002 + +0.6 73,003 - -0.2 73,014 - +0.3 73,082 + +0.5 73,109 + +0.2 73,241 - +0.4 73,371 - EX28DRAFT_3864 0.18 -1.9 73,446 - EX28DRAFT_3864 0.24 -1.5 73,617 + EX28DRAFT_3864 0.37 -2.8 73,626 + EX28DRAFT_3864 0.38 -2.5 73,653 - EX28DRAFT_3864 0.40 -1.6 74,119 + EX28DRAFT_3864 0.76 -1.1 74,120 - EX28DRAFT_3864 0.76 -1.2 74,120 - EX28DRAFT_3864 0.76 -1.0 74,268 + EX28DRAFT_3864 0.88 -1.1 74,424 + -0.1 74,491 + +0.2 74,492 - -0.7 74,493 + -0.1 74,493 + +0.8 74,493 + +0.9 74,494 - +0.6 74,494 - +0.8 74,494 - -0.0 74,760 + EX28DRAFT_3865 0.34 +0.0 74,761 - EX28DRAFT_3865 0.34 -0.0 74,799 - EX28DRAFT_3865 0.38 -1.5 74,945 + EX28DRAFT_3865 0.54 -0.7 75,003 - EX28DRAFT_3865 0.61 -0.5 75,168 - EX28DRAFT_3865 0.79 +0.2 75,239 + EX28DRAFT_3865 0.86 +0.4 75,240 - EX28DRAFT_3865 0.87 -0.4 75,262 - EX28DRAFT_3865 0.89 +0.2 75,262 - EX28DRAFT_3865 0.89 -1.7 75,303 - +0.1 75,308 + +0.9 75,308 + -0.2 75,321 + +0.3 75,321 + -0.3 75,322 - -0.1
Or see this region's nucleotide sequence