Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3372 and EX28DRAFT_3373 are separated by 71 nucleotides EX28DRAFT_3373 and EX28DRAFT_3374 are separated by 62 nucleotides
EX28DRAFT_3372: EX28DRAFT_3372 - HflC protein, at 40,574 to 41,578
_3372
EX28DRAFT_3373: EX28DRAFT_3373 - Uncharacterized protein conserved in bacteria, at 41,650 to 41,847
_3373
EX28DRAFT_3374: EX28DRAFT_3374 - Adenylosuccinate synthetase (EC 6.3.4.4), at 41,910 to 43,250
_3374
Position (kb) 41
42 Strain fitness (log2 ratio) -2
-1
0
1
2 at 40.664 kb on - strand at 40.664 kb on - strand at 40.716 kb on - strand, within EX28DRAFT_3372 at 40.847 kb on + strand, within EX28DRAFT_3372 at 40.848 kb on - strand, within EX28DRAFT_3372 at 40.937 kb on - strand, within EX28DRAFT_3372 at 40.937 kb on - strand, within EX28DRAFT_3372 at 41.200 kb on + strand, within EX28DRAFT_3372 at 41.453 kb on + strand, within EX28DRAFT_3372 at 41.548 kb on + strand at 41.549 kb on - strand at 41.549 kb on - strand at 41.637 kb on - strand at 41.639 kb on - strand at 41.716 kb on + strand, within EX28DRAFT_3373 at 41.770 kb on - strand, within EX28DRAFT_3373 at 41.818 kb on + strand, within EX28DRAFT_3373 at 41.818 kb on + strand, within EX28DRAFT_3373 at 41.818 kb on + strand, within EX28DRAFT_3373 at 41.819 kb on - strand, within EX28DRAFT_3373 at 41.821 kb on + strand, within EX28DRAFT_3373 at 41.821 kb on + strand, within EX28DRAFT_3373 at 41.821 kb on + strand, within EX28DRAFT_3373 at 41.871 kb on + strand at 41.872 kb on - strand at 41.894 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 40,664 - -0.0 40,664 - +0.6 40,716 - EX28DRAFT_3372 0.14 +0.3 40,847 + EX28DRAFT_3372 0.27 +0.6 40,848 - EX28DRAFT_3372 0.27 -0.3 40,937 - EX28DRAFT_3372 0.36 +0.2 40,937 - EX28DRAFT_3372 0.36 +0.1 41,200 + EX28DRAFT_3372 0.62 +0.2 41,453 + EX28DRAFT_3372 0.87 -0.6 41,548 + +0.8 41,549 - -0.5 41,549 - +0.0 41,637 - -0.1 41,639 - -0.8 41,716 + EX28DRAFT_3373 0.33 -1.2 41,770 - EX28DRAFT_3373 0.61 +0.3 41,818 + EX28DRAFT_3373 0.85 -0.7 41,818 + EX28DRAFT_3373 0.85 -0.6 41,818 + EX28DRAFT_3373 0.85 -1.4 41,819 - EX28DRAFT_3373 0.85 -0.5 41,821 + EX28DRAFT_3373 0.86 +2.3 41,821 + EX28DRAFT_3373 0.86 +0.7 41,821 + EX28DRAFT_3373 0.86 -0.7 41,871 + -0.5 41,872 - -0.7 41,894 + -2.7
Or see this region's nucleotide sequence