Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3243 and EX28DRAFT_3244 are separated by 50 nucleotides EX28DRAFT_3244 and EX28DRAFT_3245 are separated by 126 nucleotides EX28DRAFT_3245 and EX28DRAFT_3246 overlap by 1 nucleotides
EX28DRAFT_3243: EX28DRAFT_3243 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 538,685 to 539,944
_3243
EX28DRAFT_3244: EX28DRAFT_3244 - Predicted transcriptional regulator, BolA superfamily, at 539,995 to 540,249
_3244
EX28DRAFT_3245: EX28DRAFT_3245 - Predicted NTP binding protein (contains STAS domain), at 540,376 to 540,669
_3245
EX28DRAFT_3246: EX28DRAFT_3246 - ABC-type transport system involved in resistance to organic solvents, auxiliary component, at 540,669 to 541,304
_3246
Position (kb) 539
540
541 Strain fitness (log2 ratio) -2
-1
0
1 at 539.958 kb on - strand at 539.960 kb on - strand at 540.008 kb on - strand at 540.084 kb on - strand, within EX28DRAFT_3244 at 540.258 kb on - strand at 540.292 kb on - strand at 540.313 kb on - strand at 540.360 kb on + strand at 540.408 kb on - strand, within EX28DRAFT_3245 at 540.538 kb on + strand, within EX28DRAFT_3245 at 540.671 kb on - strand at 540.671 kb on - strand at 540.671 kb on - strand at 540.917 kb on + strand, within EX28DRAFT_3246 at 540.955 kb on + strand, within EX28DRAFT_3246 at 540.955 kb on + strand, within EX28DRAFT_3246 at 540.956 kb on - strand, within EX28DRAFT_3246 at 540.971 kb on - strand, within EX28DRAFT_3246 at 541.027 kb on + strand, within EX28DRAFT_3246 at 541.061 kb on - strand, within EX28DRAFT_3246 at 541.061 kb on - strand, within EX28DRAFT_3246 at 541.061 kb on - strand, within EX28DRAFT_3246 at 541.063 kb on + strand, within EX28DRAFT_3246 at 541.064 kb on - strand, within EX28DRAFT_3246 at 541.090 kb on + strand, within EX28DRAFT_3246 at 541.151 kb on + strand, within EX28DRAFT_3246 at 541.164 kb on - strand, within EX28DRAFT_3246
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 539,958 - +0.6 539,960 - +0.1 540,008 - +0.5 540,084 - EX28DRAFT_3244 0.35 -0.3 540,258 - -0.2 540,292 - +0.2 540,313 - +1.1 540,360 + +0.1 540,408 - EX28DRAFT_3245 0.11 -0.1 540,538 + EX28DRAFT_3245 0.55 +0.3 540,671 - +0.3 540,671 - -0.1 540,671 - +0.1 540,917 + EX28DRAFT_3246 0.39 +0.5 540,955 + EX28DRAFT_3246 0.45 -2.5 540,955 + EX28DRAFT_3246 0.45 -0.3 540,956 - EX28DRAFT_3246 0.45 -1.9 540,971 - EX28DRAFT_3246 0.47 -0.5 541,027 + EX28DRAFT_3246 0.56 -0.3 541,061 - EX28DRAFT_3246 0.62 -0.6 541,061 - EX28DRAFT_3246 0.62 +0.1 541,061 - EX28DRAFT_3246 0.62 -0.0 541,063 + EX28DRAFT_3246 0.62 +0.1 541,064 - EX28DRAFT_3246 0.62 +0.1 541,090 + EX28DRAFT_3246 0.66 +0.2 541,151 + EX28DRAFT_3246 0.76 -0.7 541,164 - EX28DRAFT_3246 0.78 +0.0
Or see this region's nucleotide sequence