Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3080 and EX28DRAFT_3081 are separated by 40 nucleotides EX28DRAFT_3081 and EX28DRAFT_3082 are separated by 21 nucleotides
EX28DRAFT_3080: EX28DRAFT_3080 - rfaE bifunctional protein, domain I/rfaE bifunctional protein, domain II, at 389,855 to 391,285
_3080
EX28DRAFT_3081: EX28DRAFT_3081 - Glutamine synthetase adenylyltransferase, at 391,326 to 394,181
_3081
EX28DRAFT_3082: EX28DRAFT_3082 - Uncharacterized conserved protein, at 394,203 to 395,504
_3082
Position (kb) 391
392
393
394
395 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 391.341 kb on + strand at 391.673 kb on + strand, within EX28DRAFT_3081 at 391.805 kb on - strand, within EX28DRAFT_3081 at 392.043 kb on + strand, within EX28DRAFT_3081 at 392.043 kb on + strand, within EX28DRAFT_3081 at 392.073 kb on + strand, within EX28DRAFT_3081 at 392.073 kb on + strand, within EX28DRAFT_3081 at 392.074 kb on - strand, within EX28DRAFT_3081 at 392.090 kb on + strand, within EX28DRAFT_3081 at 392.090 kb on + strand, within EX28DRAFT_3081 at 392.090 kb on + strand, within EX28DRAFT_3081 at 392.211 kb on + strand, within EX28DRAFT_3081 at 392.211 kb on + strand, within EX28DRAFT_3081 at 392.211 kb on + strand, within EX28DRAFT_3081 at 392.248 kb on - strand, within EX28DRAFT_3081 at 392.325 kb on - strand, within EX28DRAFT_3081 at 392.384 kb on - strand, within EX28DRAFT_3081 at 392.551 kb on - strand, within EX28DRAFT_3081 at 392.563 kb on + strand, within EX28DRAFT_3081 at 392.564 kb on - strand, within EX28DRAFT_3081 at 392.570 kb on + strand, within EX28DRAFT_3081 at 392.589 kb on + strand, within EX28DRAFT_3081 at 392.769 kb on + strand, within EX28DRAFT_3081 at 392.789 kb on + strand, within EX28DRAFT_3081 at 392.790 kb on - strand, within EX28DRAFT_3081 at 392.901 kb on + strand, within EX28DRAFT_3081 at 393.026 kb on + strand, within EX28DRAFT_3081 at 393.027 kb on - strand, within EX28DRAFT_3081 at 393.064 kb on + strand, within EX28DRAFT_3081 at 393.180 kb on - strand, within EX28DRAFT_3081 at 393.180 kb on - strand, within EX28DRAFT_3081 at 393.200 kb on + strand, within EX28DRAFT_3081 at 393.290 kb on + strand, within EX28DRAFT_3081 at 393.326 kb on - strand, within EX28DRAFT_3081 at 393.326 kb on - strand, within EX28DRAFT_3081 at 393.452 kb on - strand, within EX28DRAFT_3081 at 393.452 kb on - strand, within EX28DRAFT_3081 at 393.828 kb on + strand, within EX28DRAFT_3081 at 393.855 kb on + strand, within EX28DRAFT_3081 at 394.182 kb on + strand at 394.182 kb on + strand at 394.183 kb on - strand at 394.183 kb on - strand at 394.185 kb on - strand at 394.185 kb on - strand at 394.204 kb on + strand at 394.204 kb on + strand at 394.411 kb on + strand, within EX28DRAFT_3082 at 394.411 kb on + strand, within EX28DRAFT_3082 at 394.440 kb on - strand, within EX28DRAFT_3082 at 394.600 kb on + strand, within EX28DRAFT_3082 at 394.666 kb on - strand, within EX28DRAFT_3082
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 391,341 + -0.8 391,673 + EX28DRAFT_3081 0.12 -1.6 391,805 - EX28DRAFT_3081 0.17 -3.1 392,043 + EX28DRAFT_3081 0.25 -0.2 392,043 + EX28DRAFT_3081 0.25 -2.9 392,073 + EX28DRAFT_3081 0.26 -4.1 392,073 + EX28DRAFT_3081 0.26 -3.4 392,074 - EX28DRAFT_3081 0.26 -3.6 392,090 + EX28DRAFT_3081 0.27 -3.4 392,090 + EX28DRAFT_3081 0.27 -2.6 392,090 + EX28DRAFT_3081 0.27 -1.7 392,211 + EX28DRAFT_3081 0.31 -2.9 392,211 + EX28DRAFT_3081 0.31 -2.7 392,211 + EX28DRAFT_3081 0.31 -2.9 392,248 - EX28DRAFT_3081 0.32 -0.9 392,325 - EX28DRAFT_3081 0.35 -2.0 392,384 - EX28DRAFT_3081 0.37 -2.8 392,551 - EX28DRAFT_3081 0.43 -3.8 392,563 + EX28DRAFT_3081 0.43 -3.1 392,564 - EX28DRAFT_3081 0.43 -2.1 392,570 + EX28DRAFT_3081 0.44 -3.2 392,589 + EX28DRAFT_3081 0.44 -3.5 392,769 + EX28DRAFT_3081 0.51 -2.2 392,789 + EX28DRAFT_3081 0.51 -2.5 392,790 - EX28DRAFT_3081 0.51 -3.1 392,901 + EX28DRAFT_3081 0.55 -1.5 393,026 + EX28DRAFT_3081 0.60 -4.1 393,027 - EX28DRAFT_3081 0.60 -2.2 393,064 + EX28DRAFT_3081 0.61 -3.1 393,180 - EX28DRAFT_3081 0.65 -1.9 393,180 - EX28DRAFT_3081 0.65 -3.2 393,200 + EX28DRAFT_3081 0.66 -2.6 393,290 + EX28DRAFT_3081 0.69 -3.3 393,326 - EX28DRAFT_3081 0.70 -2.3 393,326 - EX28DRAFT_3081 0.70 -5.7 393,452 - EX28DRAFT_3081 0.74 -2.3 393,452 - EX28DRAFT_3081 0.74 -3.4 393,828 + EX28DRAFT_3081 0.88 -3.6 393,855 + EX28DRAFT_3081 0.89 -2.6 394,182 + -0.2 394,182 + -0.5 394,183 - -0.7 394,183 - -0.6 394,185 - -0.4 394,185 - -0.1 394,204 + +0.1 394,204 + -0.6 394,411 + EX28DRAFT_3082 0.16 -1.8 394,411 + EX28DRAFT_3082 0.16 +0.0 394,440 - EX28DRAFT_3082 0.18 -0.6 394,600 + EX28DRAFT_3082 0.30 -0.0 394,666 - EX28DRAFT_3082 0.36 -1.0
Or see this region's nucleotide sequence