Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2967 and EX28DRAFT_2968 are separated by 48 nucleotides EX28DRAFT_2968 and EX28DRAFT_2969 are separated by 91 nucleotides EX28DRAFT_2969 and EX28DRAFT_2970 are separated by 145 nucleotides
EX28DRAFT_2967: EX28DRAFT_2967 - transcriptional regulator, ArgP family, at 276,893 to 277,786
_2967
EX28DRAFT_2968: EX28DRAFT_2968 - Uncharacterized conserved protein, at 277,835 to 278,575
_2968
EX28DRAFT_2969: EX28DRAFT_2969 - L-lysine exporter, at 278,667 to 279,302
_2969
EX28DRAFT_2970: EX28DRAFT_2970 - Small-conductance mechanosensitive channel, at 279,448 to 280,302
_2970
Position (kb) 278
279
280 Strain fitness (log2 ratio) -2
-1
0
1
2 at 277.676 kb on + strand, within EX28DRAFT_2967 at 277.694 kb on + strand, within EX28DRAFT_2967 at 277.695 kb on - strand, within EX28DRAFT_2967 at 277.784 kb on + strand at 277.836 kb on + strand at 277.847 kb on - strand at 277.932 kb on + strand, within EX28DRAFT_2968 at 277.932 kb on + strand, within EX28DRAFT_2968 at 277.932 kb on + strand, within EX28DRAFT_2968 at 277.933 kb on - strand, within EX28DRAFT_2968 at 278.002 kb on + strand, within EX28DRAFT_2968 at 278.003 kb on - strand, within EX28DRAFT_2968 at 278.003 kb on - strand, within EX28DRAFT_2968 at 278.026 kb on - strand, within EX28DRAFT_2968 at 278.200 kb on + strand, within EX28DRAFT_2968 at 278.200 kb on + strand, within EX28DRAFT_2968 at 278.201 kb on - strand, within EX28DRAFT_2968 at 278.206 kb on + strand, within EX28DRAFT_2968 at 278.206 kb on + strand, within EX28DRAFT_2968 at 278.270 kb on - strand, within EX28DRAFT_2968 at 278.286 kb on + strand, within EX28DRAFT_2968 at 278.287 kb on - strand, within EX28DRAFT_2968 at 278.299 kb on + strand, within EX28DRAFT_2968 at 278.299 kb on + strand, within EX28DRAFT_2968 at 278.300 kb on - strand, within EX28DRAFT_2968 at 278.303 kb on + strand, within EX28DRAFT_2968 at 278.303 kb on + strand, within EX28DRAFT_2968 at 278.304 kb on - strand, within EX28DRAFT_2968 at 278.319 kb on + strand, within EX28DRAFT_2968 at 278.321 kb on - strand, within EX28DRAFT_2968 at 278.329 kb on + strand, within EX28DRAFT_2968 at 278.330 kb on - strand, within EX28DRAFT_2968 at 278.333 kb on + strand, within EX28DRAFT_2968 at 278.362 kb on - strand, within EX28DRAFT_2968 at 278.541 kb on - strand at 278.544 kb on - strand at 278.544 kb on - strand at 278.579 kb on + strand at 278.633 kb on - strand at 278.656 kb on + strand at 278.656 kb on + strand at 278.657 kb on - strand at 278.750 kb on + strand, within EX28DRAFT_2969 at 278.750 kb on + strand, within EX28DRAFT_2969 at 278.750 kb on + strand, within EX28DRAFT_2969 at 278.751 kb on - strand, within EX28DRAFT_2969 at 278.751 kb on - strand, within EX28DRAFT_2969 at 278.754 kb on + strand, within EX28DRAFT_2969 at 278.755 kb on - strand, within EX28DRAFT_2969 at 278.926 kb on + strand, within EX28DRAFT_2969 at 278.927 kb on - strand, within EX28DRAFT_2969 at 278.927 kb on - strand, within EX28DRAFT_2969 at 278.960 kb on + strand, within EX28DRAFT_2969 at 278.960 kb on + strand, within EX28DRAFT_2969 at 278.960 kb on + strand, within EX28DRAFT_2969 at 278.960 kb on + strand, within EX28DRAFT_2969 at 278.961 kb on - strand, within EX28DRAFT_2969 at 278.961 kb on - strand, within EX28DRAFT_2969 at 278.964 kb on - strand, within EX28DRAFT_2969 at 278.964 kb on - strand, within EX28DRAFT_2969 at 279.055 kb on + strand, within EX28DRAFT_2969 at 279.270 kb on + strand at 279.338 kb on + strand at 279.338 kb on + strand at 279.353 kb on - strand at 279.398 kb on - strand at 279.405 kb on + strand at 279.450 kb on - strand at 279.450 kb on - strand at 279.478 kb on + strand at 279.478 kb on + strand at 279.479 kb on - strand at 279.479 kb on - strand at 279.479 kb on - strand at 279.722 kb on + strand, within EX28DRAFT_2970 at 279.900 kb on - strand, within EX28DRAFT_2970 at 279.900 kb on - strand, within EX28DRAFT_2970 at 280.062 kb on + strand, within EX28DRAFT_2970 at 280.063 kb on - strand, within EX28DRAFT_2970 at 280.156 kb on - strand, within EX28DRAFT_2970 at 280.160 kb on - strand, within EX28DRAFT_2970 at 280.282 kb on + strand at 280.282 kb on + strand at 280.283 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 277,676 + EX28DRAFT_2967 0.88 -1.6 277,694 + EX28DRAFT_2967 0.90 -0.5 277,695 - EX28DRAFT_2967 0.90 -1.3 277,784 + +0.0 277,836 + -0.7 277,847 - -0.3 277,932 + EX28DRAFT_2968 0.13 -1.0 277,932 + EX28DRAFT_2968 0.13 -0.0 277,932 + EX28DRAFT_2968 0.13 -1.2 277,933 - EX28DRAFT_2968 0.13 +0.2 278,002 + EX28DRAFT_2968 0.23 -0.5 278,003 - EX28DRAFT_2968 0.23 +0.9 278,003 - EX28DRAFT_2968 0.23 +0.4 278,026 - EX28DRAFT_2968 0.26 -1.8 278,200 + EX28DRAFT_2968 0.49 +0.1 278,200 + EX28DRAFT_2968 0.49 +1.5 278,201 - EX28DRAFT_2968 0.49 +0.2 278,206 + EX28DRAFT_2968 0.50 -0.5 278,206 + EX28DRAFT_2968 0.50 +0.6 278,270 - EX28DRAFT_2968 0.59 +0.2 278,286 + EX28DRAFT_2968 0.61 -2.0 278,287 - EX28DRAFT_2968 0.61 +0.4 278,299 + EX28DRAFT_2968 0.63 +0.4 278,299 + EX28DRAFT_2968 0.63 -0.4 278,300 - EX28DRAFT_2968 0.63 -0.3 278,303 + EX28DRAFT_2968 0.63 +1.1 278,303 + EX28DRAFT_2968 0.63 +0.6 278,304 - EX28DRAFT_2968 0.63 +0.5 278,319 + EX28DRAFT_2968 0.65 -0.3 278,321 - EX28DRAFT_2968 0.66 -1.1 278,329 + EX28DRAFT_2968 0.67 +0.1 278,330 - EX28DRAFT_2968 0.67 -1.6 278,333 + EX28DRAFT_2968 0.67 +1.6 278,362 - EX28DRAFT_2968 0.71 -0.1 278,541 - -0.5 278,544 - -1.5 278,544 - +0.5 278,579 + +0.6 278,633 - +0.6 278,656 + -0.1 278,656 + +0.3 278,657 - -0.0 278,750 + EX28DRAFT_2969 0.13 +0.1 278,750 + EX28DRAFT_2969 0.13 -1.3 278,750 + EX28DRAFT_2969 0.13 +0.1 278,751 - EX28DRAFT_2969 0.13 +0.2 278,751 - EX28DRAFT_2969 0.13 -0.3 278,754 + EX28DRAFT_2969 0.14 +0.3 278,755 - EX28DRAFT_2969 0.14 +0.2 278,926 + EX28DRAFT_2969 0.41 +0.2 278,927 - EX28DRAFT_2969 0.41 +0.6 278,927 - EX28DRAFT_2969 0.41 -0.2 278,960 + EX28DRAFT_2969 0.46 -0.0 278,960 + EX28DRAFT_2969 0.46 -0.3 278,960 + EX28DRAFT_2969 0.46 -1.0 278,960 + EX28DRAFT_2969 0.46 +2.6 278,961 - EX28DRAFT_2969 0.46 +2.3 278,961 - EX28DRAFT_2969 0.46 -0.0 278,964 - EX28DRAFT_2969 0.47 +0.2 278,964 - EX28DRAFT_2969 0.47 -0.5 279,055 + EX28DRAFT_2969 0.61 -0.2 279,270 + +0.4 279,338 + -1.3 279,338 + +0.6 279,353 - -0.4 279,398 - -1.3 279,405 + +0.4 279,450 - +0.0 279,450 - +0.4 279,478 + +0.0 279,478 + -0.5 279,479 - +0.3 279,479 - +0.7 279,479 - +0.3 279,722 + EX28DRAFT_2970 0.32 +1.1 279,900 - EX28DRAFT_2970 0.53 +0.2 279,900 - EX28DRAFT_2970 0.53 +0.1 280,062 + EX28DRAFT_2970 0.72 +0.2 280,063 - EX28DRAFT_2970 0.72 -0.4 280,156 - EX28DRAFT_2970 0.83 -0.3 280,160 - EX28DRAFT_2970 0.83 +0.4 280,282 + +0.4 280,282 + +0.6 280,283 - +0.5
Or see this region's nucleotide sequence