Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2629 and EX28DRAFT_2630 overlap by 8 nucleotides EX28DRAFT_2630 and EX28DRAFT_2631 are separated by 14 nucleotides
EX28DRAFT_2629: EX28DRAFT_2629 - nucleoside diphosphate kinase (EC 2.7.4.6), at 2,668,309 to 2,669,370
_2629
EX28DRAFT_2630: EX28DRAFT_2630 - hypothetical protein, at 2,669,363 to 2,670,073
_2630
EX28DRAFT_2631: EX28DRAFT_2631 - Protein of unknown function (DUF2817), at 2,670,088 to 2,671,146
_2631
Position (kb)
2669
2670
2671 Strain fitness (log2 ratio)
-2
-1
0
1 at 2668.794 kb on - strand, within EX28DRAFT_2629 at 2668.798 kb on - strand, within EX28DRAFT_2629 at 2669.270 kb on + strand at 2669.314 kb on - strand at 2669.377 kb on + strand at 2669.553 kb on + strand, within EX28DRAFT_2630 at 2669.611 kb on + strand, within EX28DRAFT_2630 at 2669.611 kb on + strand, within EX28DRAFT_2630 at 2669.730 kb on - strand, within EX28DRAFT_2630 at 2670.011 kb on - strand at 2670.030 kb on - strand at 2670.084 kb on + strand at 2670.085 kb on - strand at 2670.085 kb on - strand at 2670.097 kb on + strand at 2670.097 kb on + strand at 2670.097 kb on + strand at 2670.097 kb on + strand at 2670.098 kb on - strand at 2670.098 kb on - strand at 2670.121 kb on - strand at 2670.153 kb on - strand at 2670.200 kb on + strand, within EX28DRAFT_2631 at 2670.205 kb on + strand, within EX28DRAFT_2631 at 2670.206 kb on - strand, within EX28DRAFT_2631 at 2670.208 kb on - strand, within EX28DRAFT_2631 at 2670.208 kb on - strand, within EX28DRAFT_2631 at 2670.279 kb on - strand, within EX28DRAFT_2631 at 2670.334 kb on - strand, within EX28DRAFT_2631 at 2670.373 kb on - strand, within EX28DRAFT_2631 at 2670.405 kb on + strand, within EX28DRAFT_2631 at 2670.406 kb on - strand, within EX28DRAFT_2631 at 2670.546 kb on + strand, within EX28DRAFT_2631 at 2670.570 kb on - strand, within EX28DRAFT_2631 at 2670.570 kb on - strand, within EX28DRAFT_2631 at 2670.619 kb on + strand, within EX28DRAFT_2631 at 2670.665 kb on + strand, within EX28DRAFT_2631 at 2670.665 kb on + strand, within EX28DRAFT_2631 at 2670.665 kb on + strand, within EX28DRAFT_2631 at 2670.665 kb on + strand, within EX28DRAFT_2631 at 2670.666 kb on - strand, within EX28DRAFT_2631 at 2670.666 kb on - strand, within EX28DRAFT_2631 at 2670.743 kb on + strand, within EX28DRAFT_2631 at 2670.743 kb on + strand, within EX28DRAFT_2631 at 2670.743 kb on + strand, within EX28DRAFT_2631 at 2670.743 kb on + strand, within EX28DRAFT_2631 at 2670.743 kb on + strand, within EX28DRAFT_2631 at 2670.744 kb on - strand, within EX28DRAFT_2631 at 2670.744 kb on - strand, within EX28DRAFT_2631 at 2670.744 kb on - strand, within EX28DRAFT_2631 at 2670.744 kb on - strand, within EX28DRAFT_2631 at 2670.744 kb on - strand, within EX28DRAFT_2631 at 2670.744 kb on - strand, within EX28DRAFT_2631 at 2670.747 kb on + strand, within EX28DRAFT_2631 at 2670.748 kb on - strand, within EX28DRAFT_2631 at 2670.804 kb on + strand, within EX28DRAFT_2631 at 2670.809 kb on - strand, within EX28DRAFT_2631 at 2670.899 kb on - strand, within EX28DRAFT_2631 at 2670.899 kb on - strand, within EX28DRAFT_2631 at 2670.911 kb on + strand, within EX28DRAFT_2631 at 2670.912 kb on - strand, within EX28DRAFT_2631 at 2670.997 kb on + strand, within EX28DRAFT_2631
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,668,794 - EX28DRAFT_2629 0.46 +0.3 2,668,798 - EX28DRAFT_2629 0.46 -0.2 2,669,270 + -1.1 2,669,314 - +0.1 2,669,377 + -0.1 2,669,553 + EX28DRAFT_2630 0.27 -0.3 2,669,611 + EX28DRAFT_2630 0.35 -0.2 2,669,611 + EX28DRAFT_2630 0.35 -0.1 2,669,730 - EX28DRAFT_2630 0.52 +1.1 2,670,011 - +0.9 2,670,030 - +0.3 2,670,084 + -0.1 2,670,085 - -0.4 2,670,085 - -0.3 2,670,097 + -0.2 2,670,097 + -0.4 2,670,097 + +0.0 2,670,097 + -0.2 2,670,098 - +0.0 2,670,098 - -0.2 2,670,121 - -0.5 2,670,153 - -0.2 2,670,200 + EX28DRAFT_2631 0.11 -0.1 2,670,205 + EX28DRAFT_2631 0.11 +0.3 2,670,206 - EX28DRAFT_2631 0.11 -1.0 2,670,208 - EX28DRAFT_2631 0.11 +0.2 2,670,208 - EX28DRAFT_2631 0.11 +0.1 2,670,279 - EX28DRAFT_2631 0.18 +0.5 2,670,334 - EX28DRAFT_2631 0.23 -0.7 2,670,373 - EX28DRAFT_2631 0.27 -0.6 2,670,405 + EX28DRAFT_2631 0.30 -0.2 2,670,406 - EX28DRAFT_2631 0.30 +0.1 2,670,546 + EX28DRAFT_2631 0.43 -0.3 2,670,570 - EX28DRAFT_2631 0.46 -0.4 2,670,570 - EX28DRAFT_2631 0.46 +0.0 2,670,619 + EX28DRAFT_2631 0.50 +0.0 2,670,665 + EX28DRAFT_2631 0.54 -0.2 2,670,665 + EX28DRAFT_2631 0.54 +0.0 2,670,665 + EX28DRAFT_2631 0.54 -0.0 2,670,665 + EX28DRAFT_2631 0.54 -0.1 2,670,666 - EX28DRAFT_2631 0.55 +0.4 2,670,666 - EX28DRAFT_2631 0.55 +0.2 2,670,743 + EX28DRAFT_2631 0.62 +1.5 2,670,743 + EX28DRAFT_2631 0.62 -0.9 2,670,743 + EX28DRAFT_2631 0.62 +0.0 2,670,743 + EX28DRAFT_2631 0.62 +0.6 2,670,743 + EX28DRAFT_2631 0.62 +0.0 2,670,744 - EX28DRAFT_2631 0.62 -0.5 2,670,744 - EX28DRAFT_2631 0.62 -0.1 2,670,744 - EX28DRAFT_2631 0.62 +0.9 2,670,744 - EX28DRAFT_2631 0.62 +0.1 2,670,744 - EX28DRAFT_2631 0.62 -0.6 2,670,744 - EX28DRAFT_2631 0.62 +0.3 2,670,747 + EX28DRAFT_2631 0.62 +0.2 2,670,748 - EX28DRAFT_2631 0.62 +0.1 2,670,804 + EX28DRAFT_2631 0.68 -0.2 2,670,809 - EX28DRAFT_2631 0.68 -0.6 2,670,899 - EX28DRAFT_2631 0.77 -0.1 2,670,899 - EX28DRAFT_2631 0.77 +0.3 2,670,911 + EX28DRAFT_2631 0.78 +0.0 2,670,912 - EX28DRAFT_2631 0.78 -1.8 2,670,997 + EX28DRAFT_2631 0.86 -0.2
Or see this region's nucleotide sequence