Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2435 and EX28DRAFT_2436 are separated by 1 nucleotides EX28DRAFT_2436 and EX28DRAFT_2437 are separated by 24 nucleotides
EX28DRAFT_2435: EX28DRAFT_2435 - ABC-type spermidine/putrescine transport systems, ATPase components, at 2,465,426 to 2,466,457
_2435
EX28DRAFT_2436: EX28DRAFT_2436 - ABC-type Fe3+ transport system, permease component, at 2,466,459 to 2,468,033
_2436
EX28DRAFT_2437: EX28DRAFT_2437 - ABC-type Fe3+ transport system, periplasmic component, at 2,468,058 to 2,469,074
_2437
Position (kb)
2466
2467
2468
2469 Strain fitness (log2 ratio)
-1
0
1 at 2465.504 kb on + strand at 2465.630 kb on + strand, within EX28DRAFT_2435 at 2465.631 kb on - strand, within EX28DRAFT_2435 at 2465.794 kb on - strand, within EX28DRAFT_2435 at 2465.802 kb on + strand, within EX28DRAFT_2435 at 2465.802 kb on + strand, within EX28DRAFT_2435 at 2466.322 kb on + strand, within EX28DRAFT_2435 at 2466.489 kb on - strand at 2466.490 kb on + strand at 2466.490 kb on + strand at 2466.556 kb on + strand at 2466.556 kb on + strand at 2466.557 kb on - strand at 2466.557 kb on - strand at 2466.819 kb on - strand, within EX28DRAFT_2436 at 2466.832 kb on + strand, within EX28DRAFT_2436 at 2466.848 kb on + strand, within EX28DRAFT_2436 at 2466.848 kb on + strand, within EX28DRAFT_2436 at 2466.863 kb on - strand, within EX28DRAFT_2436 at 2466.940 kb on + strand, within EX28DRAFT_2436 at 2466.940 kb on + strand, within EX28DRAFT_2436 at 2466.940 kb on + strand, within EX28DRAFT_2436 at 2466.941 kb on - strand, within EX28DRAFT_2436 at 2466.941 kb on - strand, within EX28DRAFT_2436 at 2466.941 kb on - strand, within EX28DRAFT_2436 at 2466.941 kb on - strand, within EX28DRAFT_2436 at 2466.941 kb on - strand, within EX28DRAFT_2436 at 2466.941 kb on - strand, within EX28DRAFT_2436 at 2466.941 kb on - strand, within EX28DRAFT_2436 at 2467.134 kb on + strand, within EX28DRAFT_2436 at 2467.290 kb on + strand, within EX28DRAFT_2436 at 2467.290 kb on + strand, within EX28DRAFT_2436 at 2467.356 kb on - strand, within EX28DRAFT_2436 at 2467.420 kb on + strand, within EX28DRAFT_2436 at 2467.588 kb on + strand, within EX28DRAFT_2436 at 2467.588 kb on + strand, within EX28DRAFT_2436 at 2467.588 kb on + strand, within EX28DRAFT_2436 at 2467.588 kb on + strand, within EX28DRAFT_2436 at 2467.589 kb on - strand, within EX28DRAFT_2436 at 2467.589 kb on - strand, within EX28DRAFT_2436 at 2467.589 kb on - strand, within EX28DRAFT_2436 at 2467.600 kb on + strand, within EX28DRAFT_2436 at 2467.604 kb on - strand, within EX28DRAFT_2436 at 2467.672 kb on + strand, within EX28DRAFT_2436 at 2467.672 kb on + strand, within EX28DRAFT_2436 at 2467.673 kb on - strand, within EX28DRAFT_2436 at 2467.787 kb on + strand, within EX28DRAFT_2436 at 2467.869 kb on - strand, within EX28DRAFT_2436 at 2467.932 kb on + strand at 2467.950 kb on + strand at 2468.033 kb on + strand at 2468.033 kb on + strand at 2468.034 kb on - strand at 2468.034 kb on - strand at 2468.034 kb on - strand at 2468.034 kb on - strand at 2468.034 kb on - strand at 2468.034 kb on - strand at 2468.048 kb on - strand at 2468.100 kb on - strand at 2468.246 kb on - strand, within EX28DRAFT_2437 at 2468.246 kb on - strand, within EX28DRAFT_2437 at 2468.344 kb on + strand, within EX28DRAFT_2437 at 2468.344 kb on + strand, within EX28DRAFT_2437 at 2468.344 kb on + strand, within EX28DRAFT_2437 at 2468.348 kb on - strand, within EX28DRAFT_2437 at 2468.401 kb on + strand, within EX28DRAFT_2437 at 2468.404 kb on + strand, within EX28DRAFT_2437 at 2468.404 kb on + strand, within EX28DRAFT_2437 at 2468.410 kb on + strand, within EX28DRAFT_2437 at 2468.473 kb on + strand, within EX28DRAFT_2437 at 2468.474 kb on - strand, within EX28DRAFT_2437 at 2468.474 kb on - strand, within EX28DRAFT_2437 at 2468.634 kb on - strand, within EX28DRAFT_2437 at 2468.668 kb on + strand, within EX28DRAFT_2437 at 2468.676 kb on + strand, within EX28DRAFT_2437 at 2468.676 kb on + strand, within EX28DRAFT_2437 at 2468.677 kb on - strand, within EX28DRAFT_2437 at 2468.725 kb on + strand, within EX28DRAFT_2437 at 2468.968 kb on + strand, within EX28DRAFT_2437 at 2468.968 kb on + strand, within EX28DRAFT_2437 at 2468.969 kb on - strand, within EX28DRAFT_2437 at 2469.012 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,465,504 + -0.8 2,465,630 + EX28DRAFT_2435 0.20 -0.7 2,465,631 - EX28DRAFT_2435 0.20 -0.2 2,465,794 - EX28DRAFT_2435 0.36 -0.6 2,465,802 + EX28DRAFT_2435 0.36 +0.1 2,465,802 + EX28DRAFT_2435 0.36 -0.1 2,466,322 + EX28DRAFT_2435 0.87 +0.6 2,466,489 - -0.5 2,466,490 + +0.4 2,466,490 + +0.1 2,466,556 + +0.1 2,466,556 + -0.4 2,466,557 - +0.7 2,466,557 - -0.1 2,466,819 - EX28DRAFT_2436 0.23 -0.4 2,466,832 + EX28DRAFT_2436 0.24 -0.2 2,466,848 + EX28DRAFT_2436 0.25 +0.4 2,466,848 + EX28DRAFT_2436 0.25 -0.2 2,466,863 - EX28DRAFT_2436 0.26 +0.3 2,466,940 + EX28DRAFT_2436 0.31 -0.4 2,466,940 + EX28DRAFT_2436 0.31 -0.9 2,466,940 + EX28DRAFT_2436 0.31 -0.2 2,466,941 - EX28DRAFT_2436 0.31 -0.6 2,466,941 - EX28DRAFT_2436 0.31 +0.1 2,466,941 - EX28DRAFT_2436 0.31 +0.1 2,466,941 - EX28DRAFT_2436 0.31 -0.3 2,466,941 - EX28DRAFT_2436 0.31 -0.5 2,466,941 - EX28DRAFT_2436 0.31 +0.9 2,466,941 - EX28DRAFT_2436 0.31 -0.6 2,467,134 + EX28DRAFT_2436 0.43 +0.8 2,467,290 + EX28DRAFT_2436 0.53 +0.0 2,467,290 + EX28DRAFT_2436 0.53 -1.2 2,467,356 - EX28DRAFT_2436 0.57 -0.2 2,467,420 + EX28DRAFT_2436 0.61 -0.1 2,467,588 + EX28DRAFT_2436 0.72 -0.2 2,467,588 + EX28DRAFT_2436 0.72 +0.8 2,467,588 + EX28DRAFT_2436 0.72 +0.7 2,467,588 + EX28DRAFT_2436 0.72 -0.0 2,467,589 - EX28DRAFT_2436 0.72 -0.3 2,467,589 - EX28DRAFT_2436 0.72 +0.1 2,467,589 - EX28DRAFT_2436 0.72 -0.0 2,467,600 + EX28DRAFT_2436 0.72 +0.0 2,467,604 - EX28DRAFT_2436 0.73 -0.4 2,467,672 + EX28DRAFT_2436 0.77 +1.1 2,467,672 + EX28DRAFT_2436 0.77 -0.3 2,467,673 - EX28DRAFT_2436 0.77 -0.0 2,467,787 + EX28DRAFT_2436 0.84 +0.7 2,467,869 - EX28DRAFT_2436 0.90 -0.2 2,467,932 + -0.2 2,467,950 + -0.4 2,468,033 + -0.1 2,468,033 + -1.1 2,468,034 - -0.0 2,468,034 - -0.3 2,468,034 - +0.1 2,468,034 - +0.6 2,468,034 - +1.4 2,468,034 - -1.1 2,468,048 - -0.9 2,468,100 - -0.0 2,468,246 - EX28DRAFT_2437 0.18 +0.3 2,468,246 - EX28DRAFT_2437 0.18 -0.1 2,468,344 + EX28DRAFT_2437 0.28 +0.5 2,468,344 + EX28DRAFT_2437 0.28 -0.8 2,468,344 + EX28DRAFT_2437 0.28 +0.1 2,468,348 - EX28DRAFT_2437 0.29 -0.3 2,468,401 + EX28DRAFT_2437 0.34 -0.4 2,468,404 + EX28DRAFT_2437 0.34 -0.7 2,468,404 + EX28DRAFT_2437 0.34 -0.2 2,468,410 + EX28DRAFT_2437 0.35 +0.2 2,468,473 + EX28DRAFT_2437 0.41 -0.2 2,468,474 - EX28DRAFT_2437 0.41 -0.0 2,468,474 - EX28DRAFT_2437 0.41 +0.2 2,468,634 - EX28DRAFT_2437 0.57 +0.9 2,468,668 + EX28DRAFT_2437 0.60 -1.2 2,468,676 + EX28DRAFT_2437 0.61 +0.3 2,468,676 + EX28DRAFT_2437 0.61 +0.7 2,468,677 - EX28DRAFT_2437 0.61 -0.0 2,468,725 + EX28DRAFT_2437 0.66 +0.0 2,468,968 + EX28DRAFT_2437 0.89 -0.2 2,468,968 + EX28DRAFT_2437 0.89 +0.1 2,468,969 - EX28DRAFT_2437 0.90 -0.2 2,469,012 - +0.5
Or see this region's nucleotide sequence