Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2236 and EX28DRAFT_2237 are separated by 9 nucleotides EX28DRAFT_2237 and EX28DRAFT_2238 are separated by 5 nucleotides
EX28DRAFT_2236: EX28DRAFT_2236 - UDP-glucose-4-epimerase GalE, at 2,259,682 to 2,260,698
_2236
EX28DRAFT_2237: EX28DRAFT_2237 - galactose-1-phosphate uridylyltransferase, family 1, at 2,260,708 to 2,261,754
_2237
EX28DRAFT_2238: EX28DRAFT_2238 - galactokinase, at 2,261,760 to 2,262,908
_2238
Position (kb)
2260
2261
2262 Strain fitness (log2 ratio)
-2
-1
0
1 at 2259.716 kb on + strand at 2259.727 kb on - strand at 2260.039 kb on - strand, within EX28DRAFT_2236 at 2260.044 kb on + strand, within EX28DRAFT_2236 at 2260.045 kb on - strand, within EX28DRAFT_2236 at 2260.087 kb on + strand, within EX28DRAFT_2236 at 2260.288 kb on + strand, within EX28DRAFT_2236 at 2260.288 kb on + strand, within EX28DRAFT_2236 at 2260.288 kb on + strand, within EX28DRAFT_2236 at 2260.288 kb on + strand, within EX28DRAFT_2236 at 2260.289 kb on - strand, within EX28DRAFT_2236 at 2260.378 kb on + strand, within EX28DRAFT_2236 at 2260.379 kb on - strand, within EX28DRAFT_2236 at 2260.448 kb on + strand, within EX28DRAFT_2236 at 2260.453 kb on - strand, within EX28DRAFT_2236 at 2260.456 kb on + strand, within EX28DRAFT_2236 at 2260.456 kb on + strand, within EX28DRAFT_2236 at 2260.456 kb on + strand, within EX28DRAFT_2236 at 2260.456 kb on + strand, within EX28DRAFT_2236 at 2260.457 kb on - strand, within EX28DRAFT_2236 at 2260.457 kb on - strand, within EX28DRAFT_2236 at 2260.457 kb on - strand, within EX28DRAFT_2236 at 2260.537 kb on + strand, within EX28DRAFT_2236 at 2260.538 kb on - strand, within EX28DRAFT_2236 at 2260.719 kb on + strand at 2260.719 kb on + strand at 2260.750 kb on - strand at 2260.912 kb on + strand, within EX28DRAFT_2237 at 2261.140 kb on + strand, within EX28DRAFT_2237 at 2261.272 kb on + strand, within EX28DRAFT_2237 at 2261.309 kb on - strand, within EX28DRAFT_2237 at 2261.643 kb on + strand, within EX28DRAFT_2237 at 2261.643 kb on + strand, within EX28DRAFT_2237 at 2261.644 kb on - strand, within EX28DRAFT_2237 at 2261.653 kb on + strand at 2261.871 kb on + strand at 2261.872 kb on - strand at 2262.038 kb on + strand, within EX28DRAFT_2238 at 2262.039 kb on - strand, within EX28DRAFT_2238 at 2262.043 kb on - strand, within EX28DRAFT_2238 at 2262.043 kb on - strand, within EX28DRAFT_2238 at 2262.103 kb on + strand, within EX28DRAFT_2238 at 2262.104 kb on - strand, within EX28DRAFT_2238 at 2262.104 kb on - strand, within EX28DRAFT_2238 at 2262.108 kb on - strand, within EX28DRAFT_2238 at 2262.139 kb on + strand, within EX28DRAFT_2238 at 2262.178 kb on + strand, within EX28DRAFT_2238 at 2262.192 kb on + strand, within EX28DRAFT_2238 at 2262.379 kb on + strand, within EX28DRAFT_2238
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,259,716 + -1.0 2,259,727 - -0.2 2,260,039 - EX28DRAFT_2236 0.35 +0.4 2,260,044 + EX28DRAFT_2236 0.36 -0.3 2,260,045 - EX28DRAFT_2236 0.36 +0.3 2,260,087 + EX28DRAFT_2236 0.40 -1.6 2,260,288 + EX28DRAFT_2236 0.60 +0.1 2,260,288 + EX28DRAFT_2236 0.60 +0.9 2,260,288 + EX28DRAFT_2236 0.60 +0.9 2,260,288 + EX28DRAFT_2236 0.60 -0.2 2,260,289 - EX28DRAFT_2236 0.60 -0.8 2,260,378 + EX28DRAFT_2236 0.68 -0.5 2,260,379 - EX28DRAFT_2236 0.69 +1.1 2,260,448 + EX28DRAFT_2236 0.75 -1.9 2,260,453 - EX28DRAFT_2236 0.76 -0.2 2,260,456 + EX28DRAFT_2236 0.76 +0.4 2,260,456 + EX28DRAFT_2236 0.76 -0.2 2,260,456 + EX28DRAFT_2236 0.76 +0.0 2,260,456 + EX28DRAFT_2236 0.76 -0.2 2,260,457 - EX28DRAFT_2236 0.76 +0.1 2,260,457 - EX28DRAFT_2236 0.76 -0.1 2,260,457 - EX28DRAFT_2236 0.76 -1.0 2,260,537 + EX28DRAFT_2236 0.84 +0.9 2,260,538 - EX28DRAFT_2236 0.84 -0.3 2,260,719 + -0.1 2,260,719 + +0.0 2,260,750 - +0.3 2,260,912 + EX28DRAFT_2237 0.19 -0.5 2,261,140 + EX28DRAFT_2237 0.41 -0.9 2,261,272 + EX28DRAFT_2237 0.54 -0.7 2,261,309 - EX28DRAFT_2237 0.57 -0.1 2,261,643 + EX28DRAFT_2237 0.89 +0.3 2,261,643 + EX28DRAFT_2237 0.89 +1.1 2,261,644 - EX28DRAFT_2237 0.89 -0.2 2,261,653 + +0.6 2,261,871 + -1.7 2,261,872 - -0.0 2,262,038 + EX28DRAFT_2238 0.24 +0.4 2,262,039 - EX28DRAFT_2238 0.24 +0.0 2,262,043 - EX28DRAFT_2238 0.25 +0.3 2,262,043 - EX28DRAFT_2238 0.25 -0.6 2,262,103 + EX28DRAFT_2238 0.30 +0.2 2,262,104 - EX28DRAFT_2238 0.30 -0.0 2,262,104 - EX28DRAFT_2238 0.30 -0.8 2,262,108 - EX28DRAFT_2238 0.30 -0.7 2,262,139 + EX28DRAFT_2238 0.33 +0.5 2,262,178 + EX28DRAFT_2238 0.36 +0.2 2,262,192 + EX28DRAFT_2238 0.38 -0.1 2,262,379 + EX28DRAFT_2238 0.54 +1.3
Or see this region's nucleotide sequence