Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2060 and EX28DRAFT_2061 are separated by 90 nucleotides EX28DRAFT_2061 and EX28DRAFT_2062 are separated by 151 nucleotides
EX28DRAFT_2060: EX28DRAFT_2060 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1, at 2,083,269 to 2,084,237
_2060
EX28DRAFT_2061: EX28DRAFT_2061 - Predicted membrane protein, at 2,084,328 to 2,084,762
_2061
EX28DRAFT_2062: EX28DRAFT_2062 - Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase], at 2,084,914 to 2,086,632
_2062
Position (kb)
2084
2085 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2083.368 kb on + strand, within EX28DRAFT_2060 at 2083.369 kb on - strand, within EX28DRAFT_2060 at 2083.369 kb on - strand, within EX28DRAFT_2060 at 2083.372 kb on - strand, within EX28DRAFT_2060 at 2083.437 kb on + strand, within EX28DRAFT_2060 at 2083.438 kb on - strand, within EX28DRAFT_2060 at 2083.470 kb on + strand, within EX28DRAFT_2060 at 2083.471 kb on - strand, within EX28DRAFT_2060 at 2083.476 kb on - strand, within EX28DRAFT_2060 at 2083.476 kb on - strand, within EX28DRAFT_2060 at 2083.548 kb on + strand, within EX28DRAFT_2060 at 2083.548 kb on + strand, within EX28DRAFT_2060 at 2083.548 kb on + strand, within EX28DRAFT_2060 at 2083.549 kb on - strand, within EX28DRAFT_2060 at 2083.549 kb on - strand, within EX28DRAFT_2060 at 2083.550 kb on + strand, within EX28DRAFT_2060 at 2083.550 kb on + strand, within EX28DRAFT_2060 at 2083.550 kb on + strand, within EX28DRAFT_2060 at 2083.550 kb on + strand, within EX28DRAFT_2060 at 2083.551 kb on - strand, within EX28DRAFT_2060 at 2083.551 kb on - strand, within EX28DRAFT_2060 at 2083.551 kb on - strand, within EX28DRAFT_2060 at 2083.604 kb on + strand, within EX28DRAFT_2060 at 2083.711 kb on + strand, within EX28DRAFT_2060 at 2083.712 kb on - strand, within EX28DRAFT_2060 at 2083.712 kb on - strand, within EX28DRAFT_2060 at 2083.712 kb on - strand, within EX28DRAFT_2060 at 2083.712 kb on - strand, within EX28DRAFT_2060 at 2083.884 kb on + strand, within EX28DRAFT_2060 at 2083.885 kb on - strand, within EX28DRAFT_2060 at 2083.893 kb on - strand, within EX28DRAFT_2060 at 2083.985 kb on + strand, within EX28DRAFT_2060 at 2083.986 kb on - strand, within EX28DRAFT_2060 at 2084.111 kb on + strand, within EX28DRAFT_2060 at 2084.136 kb on + strand, within EX28DRAFT_2060 at 2084.137 kb on - strand, within EX28DRAFT_2060 at 2084.138 kb on + strand, within EX28DRAFT_2060 at 2084.139 kb on - strand, within EX28DRAFT_2060 at 2084.188 kb on - strand at 2084.236 kb on - strand at 2084.303 kb on + strand at 2084.319 kb on - strand at 2084.319 kb on - strand at 2084.407 kb on + strand, within EX28DRAFT_2061 at 2084.408 kb on - strand, within EX28DRAFT_2061 at 2084.408 kb on - strand, within EX28DRAFT_2061 at 2084.436 kb on + strand, within EX28DRAFT_2061 at 2084.437 kb on - strand, within EX28DRAFT_2061 at 2084.437 kb on - strand, within EX28DRAFT_2061 at 2084.541 kb on - strand, within EX28DRAFT_2061 at 2084.811 kb on - strand at 2084.834 kb on + strand at 2084.882 kb on + strand at 2084.935 kb on + strand at 2084.935 kb on + strand at 2084.935 kb on + strand at 2084.935 kb on + strand at 2084.935 kb on + strand at 2084.935 kb on + strand at 2084.935 kb on + strand at 2084.935 kb on + strand at 2084.935 kb on + strand at 2084.935 kb on + strand at 2084.936 kb on - strand at 2084.936 kb on - strand at 2084.936 kb on - strand at 2084.936 kb on - strand at 2084.937 kb on + strand at 2084.937 kb on + strand at 2084.937 kb on + strand at 2084.938 kb on - strand at 2084.938 kb on - strand at 2084.938 kb on - strand at 2084.938 kb on - strand at 2084.939 kb on + strand at 2084.939 kb on + strand at 2084.940 kb on - strand at 2084.973 kb on + strand at 2084.973 kb on + strand at 2084.974 kb on - strand at 2084.974 kb on - strand at 2085.102 kb on - strand, within EX28DRAFT_2062 at 2085.292 kb on + strand, within EX28DRAFT_2062 at 2085.638 kb on - strand, within EX28DRAFT_2062 at 2085.649 kb on + strand, within EX28DRAFT_2062 at 2085.650 kb on - strand, within EX28DRAFT_2062
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,083,368 + EX28DRAFT_2060 0.10 -0.2 2,083,369 - EX28DRAFT_2060 0.10 -1.4 2,083,369 - EX28DRAFT_2060 0.10 +0.2 2,083,372 - EX28DRAFT_2060 0.11 +0.1 2,083,437 + EX28DRAFT_2060 0.17 +0.2 2,083,438 - EX28DRAFT_2060 0.17 +1.4 2,083,470 + EX28DRAFT_2060 0.21 -0.2 2,083,471 - EX28DRAFT_2060 0.21 -0.4 2,083,476 - EX28DRAFT_2060 0.21 -0.1 2,083,476 - EX28DRAFT_2060 0.21 +0.2 2,083,548 + EX28DRAFT_2060 0.29 -0.8 2,083,548 + EX28DRAFT_2060 0.29 -0.1 2,083,548 + EX28DRAFT_2060 0.29 -0.2 2,083,549 - EX28DRAFT_2060 0.29 -0.9 2,083,549 - EX28DRAFT_2060 0.29 -1.4 2,083,550 + EX28DRAFT_2060 0.29 +0.5 2,083,550 + EX28DRAFT_2060 0.29 +0.1 2,083,550 + EX28DRAFT_2060 0.29 +0.4 2,083,550 + EX28DRAFT_2060 0.29 -0.4 2,083,551 - EX28DRAFT_2060 0.29 -0.5 2,083,551 - EX28DRAFT_2060 0.29 -0.6 2,083,551 - EX28DRAFT_2060 0.29 +0.2 2,083,604 + EX28DRAFT_2060 0.35 -0.8 2,083,711 + EX28DRAFT_2060 0.46 +0.6 2,083,712 - EX28DRAFT_2060 0.46 +0.1 2,083,712 - EX28DRAFT_2060 0.46 -1.0 2,083,712 - EX28DRAFT_2060 0.46 -0.5 2,083,712 - EX28DRAFT_2060 0.46 +1.9 2,083,884 + EX28DRAFT_2060 0.63 -1.1 2,083,885 - EX28DRAFT_2060 0.64 -0.7 2,083,893 - EX28DRAFT_2060 0.64 -0.0 2,083,985 + EX28DRAFT_2060 0.74 -0.3 2,083,986 - EX28DRAFT_2060 0.74 +0.1 2,084,111 + EX28DRAFT_2060 0.87 +0.9 2,084,136 + EX28DRAFT_2060 0.89 -0.5 2,084,137 - EX28DRAFT_2060 0.90 +0.6 2,084,138 + EX28DRAFT_2060 0.90 +0.1 2,084,139 - EX28DRAFT_2060 0.90 -0.2 2,084,188 - -0.2 2,084,236 - +0.2 2,084,303 + +0.2 2,084,319 - -0.2 2,084,319 - -0.3 2,084,407 + EX28DRAFT_2061 0.18 -0.3 2,084,408 - EX28DRAFT_2061 0.18 -1.1 2,084,408 - EX28DRAFT_2061 0.18 +1.7 2,084,436 + EX28DRAFT_2061 0.25 -0.3 2,084,437 - EX28DRAFT_2061 0.25 -0.4 2,084,437 - EX28DRAFT_2061 0.25 -2.7 2,084,541 - EX28DRAFT_2061 0.49 -0.2 2,084,811 - +0.6 2,084,834 + -0.5 2,084,882 + +0.4 2,084,935 + -0.1 2,084,935 + -0.2 2,084,935 + +1.1 2,084,935 + -0.6 2,084,935 + -0.6 2,084,935 + +0.3 2,084,935 + -0.9 2,084,935 + +0.1 2,084,935 + -0.3 2,084,935 + +1.2 2,084,936 - +0.5 2,084,936 - +0.3 2,084,936 - -0.1 2,084,936 - -0.0 2,084,937 + -1.4 2,084,937 + +0.6 2,084,937 + -0.0 2,084,938 - -0.8 2,084,938 - -1.2 2,084,938 - -0.6 2,084,938 - +0.3 2,084,939 + +0.2 2,084,939 + +0.3 2,084,940 - -0.4 2,084,973 + +0.5 2,084,973 + +0.5 2,084,974 - -0.4 2,084,974 - +0.5 2,085,102 - EX28DRAFT_2062 0.11 +0.1 2,085,292 + EX28DRAFT_2062 0.22 -0.5 2,085,638 - EX28DRAFT_2062 0.42 +0.1 2,085,649 + EX28DRAFT_2062 0.43 -0.2 2,085,650 - EX28DRAFT_2062 0.43 -0.7
Or see this region's nucleotide sequence