Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0780 and EX28DRAFT_0781 are separated by 78 nucleotides EX28DRAFT_0781 and EX28DRAFT_0782 are separated by 68 nucleotides
EX28DRAFT_0780: EX28DRAFT_0780 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 777,821 to 778,831
_0780
EX28DRAFT_0781: EX28DRAFT_0781 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 778,910 to 779,890
_0781
EX28DRAFT_0782: EX28DRAFT_0782 - Fatty acid desaturase, at 779,959 to 781,011
_0782
Position (kb) 778
779
780 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 778.015 kb on + strand, within EX28DRAFT_0780 at 778.057 kb on + strand, within EX28DRAFT_0780 at 778.290 kb on + strand, within EX28DRAFT_0780 at 778.290 kb on + strand, within EX28DRAFT_0780 at 778.291 kb on - strand, within EX28DRAFT_0780 at 778.416 kb on + strand, within EX28DRAFT_0780 at 778.416 kb on + strand, within EX28DRAFT_0780 at 778.507 kb on + strand, within EX28DRAFT_0780 at 778.507 kb on + strand, within EX28DRAFT_0780 at 778.508 kb on - strand, within EX28DRAFT_0780 at 778.609 kb on + strand, within EX28DRAFT_0780 at 778.720 kb on + strand, within EX28DRAFT_0780 at 778.817 kb on - strand at 778.844 kb on - strand at 778.993 kb on + strand at 778.994 kb on - strand at 778.994 kb on - strand at 779.304 kb on + strand, within EX28DRAFT_0781 at 779.304 kb on + strand, within EX28DRAFT_0781 at 779.305 kb on - strand, within EX28DRAFT_0781 at 779.305 kb on - strand, within EX28DRAFT_0781 at 779.428 kb on + strand, within EX28DRAFT_0781 at 779.428 kb on + strand, within EX28DRAFT_0781 at 779.429 kb on - strand, within EX28DRAFT_0781 at 779.430 kb on + strand, within EX28DRAFT_0781 at 779.430 kb on + strand, within EX28DRAFT_0781 at 779.431 kb on - strand, within EX28DRAFT_0781 at 779.431 kb on - strand, within EX28DRAFT_0781 at 779.560 kb on + strand, within EX28DRAFT_0781 at 779.653 kb on + strand, within EX28DRAFT_0781 at 779.698 kb on - strand, within EX28DRAFT_0781 at 779.903 kb on - strand at 779.916 kb on - strand at 779.916 kb on - strand at 779.980 kb on - strand at 780.012 kb on + strand at 780.013 kb on - strand at 780.013 kb on - strand at 780.147 kb on + strand, within EX28DRAFT_0782 at 780.153 kb on + strand, within EX28DRAFT_0782 at 780.153 kb on + strand, within EX28DRAFT_0782 at 780.157 kb on + strand, within EX28DRAFT_0782 at 780.157 kb on + strand, within EX28DRAFT_0782 at 780.157 kb on + strand, within EX28DRAFT_0782 at 780.157 kb on + strand, within EX28DRAFT_0782 at 780.158 kb on - strand, within EX28DRAFT_0782 at 780.158 kb on - strand, within EX28DRAFT_0782 at 780.244 kb on + strand, within EX28DRAFT_0782 at 780.245 kb on - strand, within EX28DRAFT_0782 at 780.245 kb on - strand, within EX28DRAFT_0782 at 780.245 kb on - strand, within EX28DRAFT_0782 at 780.425 kb on - strand, within EX28DRAFT_0782 at 780.425 kb on - strand, within EX28DRAFT_0782 at 780.425 kb on - strand, within EX28DRAFT_0782 at 780.765 kb on + strand, within EX28DRAFT_0782 at 780.811 kb on + strand, within EX28DRAFT_0782 at 780.811 kb on + strand, within EX28DRAFT_0782 at 780.812 kb on - strand, within EX28DRAFT_0782 at 780.812 kb on - strand, within EX28DRAFT_0782 at 780.868 kb on + strand, within EX28DRAFT_0782
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 778,015 + EX28DRAFT_0780 0.19 -0.1 778,057 + EX28DRAFT_0780 0.23 +0.1 778,290 + EX28DRAFT_0780 0.46 +0.1 778,290 + EX28DRAFT_0780 0.46 +0.8 778,291 - EX28DRAFT_0780 0.46 -0.5 778,416 + EX28DRAFT_0780 0.59 +0.6 778,416 + EX28DRAFT_0780 0.59 -1.0 778,507 + EX28DRAFT_0780 0.68 +0.4 778,507 + EX28DRAFT_0780 0.68 -0.8 778,508 - EX28DRAFT_0780 0.68 -0.8 778,609 + EX28DRAFT_0780 0.78 -0.1 778,720 + EX28DRAFT_0780 0.89 +0.2 778,817 - -0.0 778,844 - +1.2 778,993 + -0.3 778,994 - +0.3 778,994 - -0.8 779,304 + EX28DRAFT_0781 0.40 -0.0 779,304 + EX28DRAFT_0781 0.40 -1.4 779,305 - EX28DRAFT_0781 0.40 -0.4 779,305 - EX28DRAFT_0781 0.40 -0.1 779,428 + EX28DRAFT_0781 0.53 -0.3 779,428 + EX28DRAFT_0781 0.53 -0.3 779,429 - EX28DRAFT_0781 0.53 -0.0 779,430 + EX28DRAFT_0781 0.53 -0.4 779,430 + EX28DRAFT_0781 0.53 +0.6 779,431 - EX28DRAFT_0781 0.53 +0.1 779,431 - EX28DRAFT_0781 0.53 -0.6 779,560 + EX28DRAFT_0781 0.66 -0.2 779,653 + EX28DRAFT_0781 0.76 +0.1 779,698 - EX28DRAFT_0781 0.80 -0.6 779,903 - -0.2 779,916 - -0.2 779,916 - -0.6 779,980 - -0.2 780,012 + -0.6 780,013 - -0.4 780,013 - +0.4 780,147 + EX28DRAFT_0782 0.18 +0.2 780,153 + EX28DRAFT_0782 0.18 +0.1 780,153 + EX28DRAFT_0782 0.18 -0.2 780,157 + EX28DRAFT_0782 0.19 +0.4 780,157 + EX28DRAFT_0782 0.19 +0.1 780,157 + EX28DRAFT_0782 0.19 -0.3 780,157 + EX28DRAFT_0782 0.19 -0.2 780,158 - EX28DRAFT_0782 0.19 -0.2 780,158 - EX28DRAFT_0782 0.19 +0.2 780,244 + EX28DRAFT_0782 0.27 -1.0 780,245 - EX28DRAFT_0782 0.27 -1.5 780,245 - EX28DRAFT_0782 0.27 +0.8 780,245 - EX28DRAFT_0782 0.27 -0.2 780,425 - EX28DRAFT_0782 0.44 -0.1 780,425 - EX28DRAFT_0782 0.44 -3.1 780,425 - EX28DRAFT_0782 0.44 +0.0 780,765 + EX28DRAFT_0782 0.77 -0.2 780,811 + EX28DRAFT_0782 0.81 +0.3 780,811 + EX28DRAFT_0782 0.81 -1.5 780,812 - EX28DRAFT_0782 0.81 +0.0 780,812 - EX28DRAFT_0782 0.81 -0.6 780,868 + EX28DRAFT_0782 0.86 +0.1
Or see this region's nucleotide sequence