Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0726 and EX28DRAFT_0727 are separated by 193 nucleotides EX28DRAFT_0727 and EX28DRAFT_0728 are separated by 50 nucleotides
EX28DRAFT_0726: EX28DRAFT_0726 - C-terminal peptidase (prc), at 724,173 to 726,221
_0726
EX28DRAFT_0727: EX28DRAFT_0727 - Zn-dependent protease with chaperone function, at 726,415 to 727,296
_0727
EX28DRAFT_0728: EX28DRAFT_0728 - Major Facilitator Superfamily, at 727,347 to 728,720
_0728
Position (kb) 726
727
728 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 725.485 kb on - strand, within EX28DRAFT_0726 at 725.562 kb on + strand, within EX28DRAFT_0726 at 725.640 kb on + strand, within EX28DRAFT_0726 at 725.844 kb on + strand, within EX28DRAFT_0726 at 726.199 kb on + strand at 726.220 kb on - strand at 726.322 kb on + strand at 726.479 kb on + strand at 726.633 kb on + strand, within EX28DRAFT_0727 at 726.654 kb on + strand, within EX28DRAFT_0727 at 726.654 kb on + strand, within EX28DRAFT_0727 at 726.655 kb on - strand, within EX28DRAFT_0727 at 727.159 kb on + strand, within EX28DRAFT_0727 at 727.159 kb on + strand, within EX28DRAFT_0727 at 727.159 kb on + strand, within EX28DRAFT_0727 at 727.159 kb on + strand, within EX28DRAFT_0727 at 727.233 kb on + strand at 727.233 kb on + strand at 727.234 kb on - strand at 727.234 kb on - strand at 727.234 kb on - strand at 727.234 kb on - strand at 727.260 kb on + strand at 727.285 kb on + strand at 727.294 kb on + strand at 727.295 kb on - strand at 727.740 kb on + strand, within EX28DRAFT_0728 at 727.741 kb on - strand, within EX28DRAFT_0728 at 727.923 kb on - strand, within EX28DRAFT_0728 at 727.923 kb on - strand, within EX28DRAFT_0728 at 727.944 kb on + strand, within EX28DRAFT_0728 at 728.169 kb on + strand, within EX28DRAFT_0728 at 728.196 kb on - strand, within EX28DRAFT_0728 at 728.199 kb on - strand, within EX28DRAFT_0728 at 728.199 kb on - strand, within EX28DRAFT_0728 at 728.246 kb on + strand, within EX28DRAFT_0728 at 728.246 kb on + strand, within EX28DRAFT_0728 at 728.247 kb on - strand, within EX28DRAFT_0728
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 725,485 - EX28DRAFT_0726 0.64 -3.6 725,562 + EX28DRAFT_0726 0.68 -1.8 725,640 + EX28DRAFT_0726 0.72 -2.7 725,844 + EX28DRAFT_0726 0.82 -2.7 726,199 + +0.4 726,220 - -0.8 726,322 + -0.4 726,479 + -0.4 726,633 + EX28DRAFT_0727 0.25 -1.6 726,654 + EX28DRAFT_0727 0.27 -0.3 726,654 + EX28DRAFT_0727 0.27 +0.3 726,655 - EX28DRAFT_0727 0.27 -0.6 727,159 + EX28DRAFT_0727 0.84 -0.9 727,159 + EX28DRAFT_0727 0.84 -0.9 727,159 + EX28DRAFT_0727 0.84 -0.8 727,159 + EX28DRAFT_0727 0.84 +1.5 727,233 + -0.4 727,233 + -0.6 727,234 - -0.9 727,234 - -0.6 727,234 - -0.5 727,234 - -0.3 727,260 + -1.8 727,285 + +0.2 727,294 + -0.3 727,295 - -0.7 727,740 + EX28DRAFT_0728 0.29 +0.1 727,741 - EX28DRAFT_0728 0.29 -0.8 727,923 - EX28DRAFT_0728 0.42 -0.0 727,923 - EX28DRAFT_0728 0.42 +0.6 727,944 + EX28DRAFT_0728 0.43 -1.2 728,169 + EX28DRAFT_0728 0.60 -0.5 728,196 - EX28DRAFT_0728 0.62 +0.0 728,199 - EX28DRAFT_0728 0.62 +1.1 728,199 - EX28DRAFT_0728 0.62 +0.6 728,246 + EX28DRAFT_0728 0.65 +0.0 728,246 + EX28DRAFT_0728 0.65 -0.9 728,247 - EX28DRAFT_0728 0.66 -0.4
Or see this region's nucleotide sequence