Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0491 and EX28DRAFT_0492 are separated by 476 nucleotides EX28DRAFT_0492 and EX28DRAFT_0493 are separated by 178 nucleotides EX28DRAFT_0493 and EX28DRAFT_0494 are separated by 6 nucleotides EX28DRAFT_0494 and EX28DRAFT_0495 are separated by 2 nucleotides
EX28DRAFT_0491: EX28DRAFT_0491 - Membrane protein TerC, possibly involved in tellurium resistance, at 482,245 to 483,828
_0491
EX28DRAFT_0492: EX28DRAFT_0492 - RNA, at 484,305 to 484,343
_0492
EX28DRAFT_0493: EX28DRAFT_0493 - Periplasmic protein involved in polysaccharide export, at 484,522 to 485,661
_0493
EX28DRAFT_0494: EX28DRAFT_0494 - Protein-tyrosine-phosphatase, at 485,668 to 486,111
_0494
EX28DRAFT_0495: EX28DRAFT_0495 - capsular exopolysaccharide family, at 486,114 to 488,276
_0495
Position (kb) 484
485
486 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 483.636 kb on + strand, within EX28DRAFT_0491 at 483.652 kb on + strand, within EX28DRAFT_0491 at 483.652 kb on + strand, within EX28DRAFT_0491 at 483.750 kb on + strand at 483.751 kb on - strand at 483.829 kb on - strand at 483.832 kb on - strand at 483.835 kb on - strand at 483.840 kb on + strand at 483.841 kb on - strand at 483.841 kb on - strand at 483.841 kb on - strand at 483.851 kb on - strand at 483.851 kb on - strand at 483.852 kb on + strand at 483.923 kb on - strand at 483.985 kb on + strand at 484.741 kb on - strand, within EX28DRAFT_0493 at 484.769 kb on - strand, within EX28DRAFT_0493 at 484.909 kb on + strand, within EX28DRAFT_0493 at 484.963 kb on - strand, within EX28DRAFT_0493 at 485.010 kb on + strand, within EX28DRAFT_0493 at 485.041 kb on + strand, within EX28DRAFT_0493 at 485.041 kb on + strand, within EX28DRAFT_0493 at 485.042 kb on - strand, within EX28DRAFT_0493 at 485.043 kb on + strand, within EX28DRAFT_0493 at 485.043 kb on + strand, within EX28DRAFT_0493 at 485.044 kb on - strand, within EX28DRAFT_0493 at 485.044 kb on - strand, within EX28DRAFT_0493 at 485.102 kb on + strand, within EX28DRAFT_0493 at 485.191 kb on - strand, within EX28DRAFT_0493 at 485.191 kb on - strand, within EX28DRAFT_0493 at 485.484 kb on + strand, within EX28DRAFT_0493 at 485.485 kb on - strand, within EX28DRAFT_0493 at 485.537 kb on - strand, within EX28DRAFT_0493 at 485.548 kb on + strand at 485.548 kb on + strand at 485.652 kb on + strand at 485.653 kb on - strand at 485.690 kb on + strand at 486.049 kb on + strand, within EX28DRAFT_0494 at 486.057 kb on - strand, within EX28DRAFT_0494 at 486.255 kb on + strand at 486.257 kb on + strand at 486.444 kb on - strand, within EX28DRAFT_0495 at 486.461 kb on + strand, within EX28DRAFT_0495
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 483,636 + EX28DRAFT_0491 0.88 -0.6 483,652 + EX28DRAFT_0491 0.89 +0.3 483,652 + EX28DRAFT_0491 0.89 +0.1 483,750 + +0.1 483,751 - +0.2 483,829 - +0.5 483,832 - +0.0 483,835 - +0.1 483,840 + +0.5 483,841 - -0.1 483,841 - -0.0 483,841 - -0.2 483,851 - -0.3 483,851 - -1.6 483,852 + +0.9 483,923 - -0.2 483,985 + -0.4 484,741 - EX28DRAFT_0493 0.19 -0.9 484,769 - EX28DRAFT_0493 0.22 +0.3 484,909 + EX28DRAFT_0493 0.34 -0.8 484,963 - EX28DRAFT_0493 0.39 +0.2 485,010 + EX28DRAFT_0493 0.43 +0.4 485,041 + EX28DRAFT_0493 0.46 -0.7 485,041 + EX28DRAFT_0493 0.46 -0.2 485,042 - EX28DRAFT_0493 0.46 +0.0 485,043 + EX28DRAFT_0493 0.46 -1.0 485,043 + EX28DRAFT_0493 0.46 -0.9 485,044 - EX28DRAFT_0493 0.46 +0.3 485,044 - EX28DRAFT_0493 0.46 -0.5 485,102 + EX28DRAFT_0493 0.51 -0.0 485,191 - EX28DRAFT_0493 0.59 -0.4 485,191 - EX28DRAFT_0493 0.59 -0.4 485,484 + EX28DRAFT_0493 0.84 -0.3 485,485 - EX28DRAFT_0493 0.84 +0.5 485,537 - EX28DRAFT_0493 0.89 -0.1 485,548 + +1.1 485,548 + -0.4 485,652 + +0.1 485,653 - -0.6 485,690 + -0.7 486,049 + EX28DRAFT_0494 0.86 -4.1 486,057 - EX28DRAFT_0494 0.88 -0.0 486,255 + -0.5 486,257 + -0.9 486,444 - EX28DRAFT_0495 0.15 +0.0 486,461 + EX28DRAFT_0495 0.16 -1.2
Or see this region's nucleotide sequence