Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0396 and EX28DRAFT_0397 are separated by 47 nucleotides EX28DRAFT_0397 and EX28DRAFT_0398 are separated by 64 nucleotides EX28DRAFT_0398 and EX28DRAFT_0399 are separated by 97 nucleotides
EX28DRAFT_0396: EX28DRAFT_0396 - PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component, at 370,219 to 371,904
_0396
EX28DRAFT_0397: EX28DRAFT_0397 - Endonuclease IV (EC 3.1.21.-), at 371,952 to 372,809
_0397
EX28DRAFT_0398: EX28DRAFT_0398 - conserved hypothetical integral membrane protein, at 372,874 to 373,920
_0398
EX28DRAFT_0399: EX28DRAFT_0399 - Transcriptional regulator, at 374,018 to 374,884
_0399
Position (kb) 372
373
374 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 372.069 kb on - strand, within EX28DRAFT_0397 at 372.179 kb on - strand, within EX28DRAFT_0397 at 372.182 kb on + strand, within EX28DRAFT_0397 at 372.182 kb on + strand, within EX28DRAFT_0397 at 372.183 kb on - strand, within EX28DRAFT_0397 at 372.183 kb on - strand, within EX28DRAFT_0397 at 372.192 kb on + strand, within EX28DRAFT_0397 at 372.192 kb on + strand, within EX28DRAFT_0397 at 372.283 kb on - strand, within EX28DRAFT_0397 at 372.300 kb on - strand, within EX28DRAFT_0397 at 372.434 kb on + strand, within EX28DRAFT_0397 at 372.434 kb on + strand, within EX28DRAFT_0397 at 372.525 kb on + strand, within EX28DRAFT_0397 at 372.525 kb on + strand, within EX28DRAFT_0397 at 372.526 kb on - strand, within EX28DRAFT_0397 at 372.526 kb on - strand, within EX28DRAFT_0397 at 372.596 kb on - strand, within EX28DRAFT_0397 at 372.634 kb on + strand, within EX28DRAFT_0397 at 372.635 kb on - strand, within EX28DRAFT_0397 at 372.635 kb on - strand, within EX28DRAFT_0397 at 372.635 kb on - strand, within EX28DRAFT_0397 at 372.802 kb on + strand at 372.839 kb on - strand at 372.839 kb on - strand at 373.092 kb on + strand, within EX28DRAFT_0398 at 373.092 kb on + strand, within EX28DRAFT_0398 at 373.098 kb on + strand, within EX28DRAFT_0398 at 373.179 kb on + strand, within EX28DRAFT_0398 at 373.325 kb on + strand, within EX28DRAFT_0398 at 373.325 kb on + strand, within EX28DRAFT_0398 at 373.325 kb on + strand, within EX28DRAFT_0398 at 373.325 kb on + strand, within EX28DRAFT_0398 at 373.326 kb on - strand, within EX28DRAFT_0398 at 373.326 kb on - strand, within EX28DRAFT_0398 at 373.326 kb on - strand, within EX28DRAFT_0398 at 373.370 kb on + strand, within EX28DRAFT_0398 at 373.371 kb on - strand, within EX28DRAFT_0398 at 373.371 kb on - strand, within EX28DRAFT_0398 at 373.371 kb on - strand, within EX28DRAFT_0398 at 373.732 kb on - strand, within EX28DRAFT_0398 at 373.746 kb on + strand, within EX28DRAFT_0398 at 373.746 kb on + strand, within EX28DRAFT_0398 at 373.750 kb on + strand, within EX28DRAFT_0398 at 373.891 kb on - strand at 373.903 kb on + strand at 373.904 kb on - strand at 373.904 kb on - strand at 373.921 kb on - strand at 373.983 kb on + strand at 374.217 kb on - strand, within EX28DRAFT_0399 at 374.321 kb on + strand, within EX28DRAFT_0399 at 374.321 kb on + strand, within EX28DRAFT_0399 at 374.322 kb on - strand, within EX28DRAFT_0399 at 374.882 kb on + strand at 374.883 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 372,069 - EX28DRAFT_0397 0.14 -0.3 372,179 - EX28DRAFT_0397 0.26 +0.1 372,182 + EX28DRAFT_0397 0.27 +0.2 372,182 + EX28DRAFT_0397 0.27 -1.4 372,183 - EX28DRAFT_0397 0.27 -0.1 372,183 - EX28DRAFT_0397 0.27 -0.0 372,192 + EX28DRAFT_0397 0.28 -0.0 372,192 + EX28DRAFT_0397 0.28 -0.1 372,283 - EX28DRAFT_0397 0.39 +0.4 372,300 - EX28DRAFT_0397 0.41 +0.7 372,434 + EX28DRAFT_0397 0.56 -0.3 372,434 + EX28DRAFT_0397 0.56 +0.0 372,525 + EX28DRAFT_0397 0.67 +0.0 372,525 + EX28DRAFT_0397 0.67 -0.3 372,526 - EX28DRAFT_0397 0.67 -1.1 372,526 - EX28DRAFT_0397 0.67 +0.1 372,596 - EX28DRAFT_0397 0.75 -0.4 372,634 + EX28DRAFT_0397 0.79 -1.7 372,635 - EX28DRAFT_0397 0.80 +0.1 372,635 - EX28DRAFT_0397 0.80 -0.3 372,635 - EX28DRAFT_0397 0.80 +0.2 372,802 + -0.3 372,839 - -0.1 372,839 - +0.1 373,092 + EX28DRAFT_0398 0.21 +0.2 373,092 + EX28DRAFT_0398 0.21 -0.5 373,098 + EX28DRAFT_0398 0.21 -0.1 373,179 + EX28DRAFT_0398 0.29 +0.0 373,325 + EX28DRAFT_0398 0.43 -0.1 373,325 + EX28DRAFT_0398 0.43 -0.2 373,325 + EX28DRAFT_0398 0.43 -0.7 373,325 + EX28DRAFT_0398 0.43 -0.2 373,326 - EX28DRAFT_0398 0.43 -0.6 373,326 - EX28DRAFT_0398 0.43 -0.2 373,326 - EX28DRAFT_0398 0.43 -0.3 373,370 + EX28DRAFT_0398 0.47 -0.2 373,371 - EX28DRAFT_0398 0.47 -0.2 373,371 - EX28DRAFT_0398 0.47 -0.3 373,371 - EX28DRAFT_0398 0.47 +0.4 373,732 - EX28DRAFT_0398 0.82 -3.3 373,746 + EX28DRAFT_0398 0.83 +0.1 373,746 + EX28DRAFT_0398 0.83 +0.3 373,750 + EX28DRAFT_0398 0.84 -1.3 373,891 - -0.9 373,903 + -0.1 373,904 - +0.0 373,904 - -0.3 373,921 - +0.9 373,983 + -2.6 374,217 - EX28DRAFT_0399 0.23 +0.6 374,321 + EX28DRAFT_0399 0.35 +0.2 374,321 + EX28DRAFT_0399 0.35 -0.3 374,322 - EX28DRAFT_0399 0.35 +0.2 374,882 + +0.3 374,883 - -0.9
Or see this region's nucleotide sequence