Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0321 and EX28DRAFT_0322 are separated by 15 nucleotides EX28DRAFT_0322 and EX28DRAFT_0323 are separated by 89 nucleotides
EX28DRAFT_0321: EX28DRAFT_0321 - NADH:ubiquinone oxidoreductase subunit 3 (chain A), at 282,618 to 283,058
_0321
EX28DRAFT_0322: EX28DRAFT_0322 - NADH-quinone oxidoreductase, B subunit, at 283,074 to 283,748
_0322
EX28DRAFT_0323: EX28DRAFT_0323 - NADH (or F420H2) dehydrogenase, subunit C, at 283,838 to 285,640
_0323
Position (kb) 283
284 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 282.209 kb on + strand at 282.525 kb on - strand at 282.535 kb on + strand at 282.535 kb on + strand at 282.596 kb on + strand at 282.624 kb on - strand at 282.678 kb on - strand, within EX28DRAFT_0321 at 283.037 kb on + strand at 283.082 kb on + strand at 283.186 kb on - strand, within EX28DRAFT_0322 at 283.236 kb on - strand, within EX28DRAFT_0322 at 283.487 kb on + strand, within EX28DRAFT_0322 at 283.491 kb on + strand, within EX28DRAFT_0322 at 283.500 kb on + strand, within EX28DRAFT_0322 at 283.501 kb on - strand, within EX28DRAFT_0322 at 283.529 kb on + strand, within EX28DRAFT_0322 at 283.545 kb on + strand, within EX28DRAFT_0322 at 283.545 kb on + strand, within EX28DRAFT_0322 at 283.545 kb on + strand, within EX28DRAFT_0322 at 283.545 kb on + strand, within EX28DRAFT_0322 at 283.579 kb on - strand, within EX28DRAFT_0322 at 283.709 kb on + strand at 283.710 kb on - strand at 283.760 kb on - strand at 283.782 kb on + strand at 284.151 kb on + strand, within EX28DRAFT_0323 at 284.247 kb on - strand, within EX28DRAFT_0323 at 284.639 kb on + strand, within EX28DRAFT_0323 at 284.640 kb on - strand, within EX28DRAFT_0323
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 282,209 + +1.1 282,525 - -1.6 282,535 + -1.6 282,535 + -1.5 282,596 + -1.0 282,624 - -0.4 282,678 - EX28DRAFT_0321 0.14 -1.3 283,037 + -0.7 283,082 + -1.1 283,186 - EX28DRAFT_0322 0.17 -3.4 283,236 - EX28DRAFT_0322 0.24 -2.5 283,487 + EX28DRAFT_0322 0.61 -3.0 283,491 + EX28DRAFT_0322 0.62 -1.9 283,500 + EX28DRAFT_0322 0.63 -1.9 283,501 - EX28DRAFT_0322 0.63 -3.8 283,529 + EX28DRAFT_0322 0.67 -1.8 283,545 + EX28DRAFT_0322 0.70 -1.5 283,545 + EX28DRAFT_0322 0.70 -1.5 283,545 + EX28DRAFT_0322 0.70 -1.7 283,545 + EX28DRAFT_0322 0.70 -3.5 283,579 - EX28DRAFT_0322 0.75 -1.7 283,709 + -1.8 283,710 - -2.4 283,760 - -1.6 283,782 + -2.6 284,151 + EX28DRAFT_0323 0.17 -1.3 284,247 - EX28DRAFT_0323 0.23 -1.2 284,639 + EX28DRAFT_0323 0.44 -2.0 284,640 - EX28DRAFT_0323 0.44 -1.6
Or see this region's nucleotide sequence