Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0311 and EX28DRAFT_0312 are separated by 72 nucleotides EX28DRAFT_0312 and EX28DRAFT_0313 are separated by 76 nucleotides
EX28DRAFT_0311: EX28DRAFT_0311 - Transketolase, C-terminal subunit, at 269,715 to 270,668
_0311
EX28DRAFT_0312: EX28DRAFT_0312 - phosphate acetyltransferase, at 270,741 to 272,882
_0312
EX28DRAFT_0313: EX28DRAFT_0313 - acetate kinase, at 272,959 to 274,161
_0313
Position (kb) 270
271
272
273 Strain fitness (log2 ratio) -2
-1
0
1 at 269.770 kb on - strand at 269.903 kb on - strand, within EX28DRAFT_0311 at 269.966 kb on + strand, within EX28DRAFT_0311 at 269.967 kb on - strand, within EX28DRAFT_0311 at 270.011 kb on + strand, within EX28DRAFT_0311 at 270.011 kb on + strand, within EX28DRAFT_0311 at 270.024 kb on + strand, within EX28DRAFT_0311 at 270.046 kb on + strand, within EX28DRAFT_0311 at 270.047 kb on - strand, within EX28DRAFT_0311 at 270.095 kb on + strand, within EX28DRAFT_0311 at 270.096 kb on - strand, within EX28DRAFT_0311 at 270.213 kb on + strand, within EX28DRAFT_0311 at 270.312 kb on - strand, within EX28DRAFT_0311 at 270.314 kb on - strand, within EX28DRAFT_0311 at 270.314 kb on - strand, within EX28DRAFT_0311 at 270.447 kb on + strand, within EX28DRAFT_0311 at 270.491 kb on + strand, within EX28DRAFT_0311 at 270.492 kb on - strand, within EX28DRAFT_0311 at 270.742 kb on + strand at 270.742 kb on + strand at 271.081 kb on - strand, within EX28DRAFT_0312 at 271.484 kb on - strand, within EX28DRAFT_0312 at 271.619 kb on + strand, within EX28DRAFT_0312 at 272.603 kb on - strand, within EX28DRAFT_0312 at 272.868 kb on - strand at 272.868 kb on - strand at 272.871 kb on - strand at 273.212 kb on + strand, within EX28DRAFT_0313 at 273.212 kb on + strand, within EX28DRAFT_0313 at 273.284 kb on + strand, within EX28DRAFT_0313 at 273.285 kb on - strand, within EX28DRAFT_0313 at 273.299 kb on + strand, within EX28DRAFT_0313 at 273.481 kb on - strand, within EX28DRAFT_0313 at 273.599 kb on + strand, within EX28DRAFT_0313 at 273.599 kb on + strand, within EX28DRAFT_0313 at 273.600 kb on - strand, within EX28DRAFT_0313 at 273.678 kb on - strand, within EX28DRAFT_0313 at 273.678 kb on - strand, within EX28DRAFT_0313
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 269,770 - +0.3 269,903 - EX28DRAFT_0311 0.20 -0.1 269,966 + EX28DRAFT_0311 0.26 +1.3 269,967 - EX28DRAFT_0311 0.26 +0.1 270,011 + EX28DRAFT_0311 0.31 -0.4 270,011 + EX28DRAFT_0311 0.31 -0.0 270,024 + EX28DRAFT_0311 0.32 +0.3 270,046 + EX28DRAFT_0311 0.35 +0.2 270,047 - EX28DRAFT_0311 0.35 +0.2 270,095 + EX28DRAFT_0311 0.40 +0.3 270,096 - EX28DRAFT_0311 0.40 -1.0 270,213 + EX28DRAFT_0311 0.52 +0.9 270,312 - EX28DRAFT_0311 0.63 -0.0 270,314 - EX28DRAFT_0311 0.63 -0.1 270,314 - EX28DRAFT_0311 0.63 +0.6 270,447 + EX28DRAFT_0311 0.77 +0.8 270,491 + EX28DRAFT_0311 0.81 +0.4 270,492 - EX28DRAFT_0311 0.81 +0.2 270,742 + +0.0 270,742 + -0.9 271,081 - EX28DRAFT_0312 0.16 -1.5 271,484 - EX28DRAFT_0312 0.35 -0.9 271,619 + EX28DRAFT_0312 0.41 -0.2 272,603 - EX28DRAFT_0312 0.87 -1.2 272,868 - -1.5 272,868 - +1.1 272,871 - +0.7 273,212 + EX28DRAFT_0313 0.21 -1.5 273,212 + EX28DRAFT_0313 0.21 -0.5 273,284 + EX28DRAFT_0313 0.27 -1.3 273,285 - EX28DRAFT_0313 0.27 -1.8 273,299 + EX28DRAFT_0313 0.28 +0.4 273,481 - EX28DRAFT_0313 0.43 -0.2 273,599 + EX28DRAFT_0313 0.53 -0.9 273,599 + EX28DRAFT_0313 0.53 +0.5 273,600 - EX28DRAFT_0313 0.53 -0.3 273,678 - EX28DRAFT_0313 0.60 -0.7 273,678 - EX28DRAFT_0313 0.60 -0.4
Or see this region's nucleotide sequence