Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0268 and EX28DRAFT_0269 are separated by 372 nucleotides EX28DRAFT_0269 and EX28DRAFT_0270 are separated by 276 nucleotides EX28DRAFT_0270 and EX28DRAFT_0271 overlap by 1 nucleotides
EX28DRAFT_0268: EX28DRAFT_0268 - Long-chain fatty acid transport protein, at 229,039 to 230,361
_0268
EX28DRAFT_0269: EX28DRAFT_0269 - conserved hypothetical protein, at 230,734 to 231,018
_0269
EX28DRAFT_0270: EX28DRAFT_0270 - fatty oxidation complex, beta subunit FadI, at 231,295 to 232,605
_0270
EX28DRAFT_0271: EX28DRAFT_0271 - fatty oxidation complex, alpha subunit FadJ, at 232,605 to 234,752
_0271
Position (kb) 231
232
233 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 230.401 kb on + strand at 230.405 kb on + strand at 230.406 kb on - strand at 230.440 kb on + strand at 230.440 kb on + strand at 230.471 kb on + strand at 230.473 kb on + strand at 230.628 kb on + strand at 230.734 kb on - strand at 230.775 kb on + strand, within EX28DRAFT_0269 at 230.776 kb on - strand, within EX28DRAFT_0269 at 230.821 kb on + strand, within EX28DRAFT_0269 at 230.821 kb on + strand, within EX28DRAFT_0269 at 231.074 kb on - strand at 231.077 kb on - strand at 231.090 kb on + strand at 231.112 kb on - strand at 231.243 kb on - strand at 231.295 kb on - strand at 231.295 kb on - strand at 231.295 kb on - strand at 231.315 kb on + strand at 231.345 kb on - strand at 231.572 kb on - strand, within EX28DRAFT_0270 at 231.738 kb on + strand, within EX28DRAFT_0270 at 231.806 kb on + strand, within EX28DRAFT_0270 at 231.807 kb on - strand, within EX28DRAFT_0270 at 231.982 kb on + strand, within EX28DRAFT_0270 at 231.982 kb on + strand, within EX28DRAFT_0270 at 231.984 kb on + strand, within EX28DRAFT_0270 at 231.984 kb on + strand, within EX28DRAFT_0270 at 232.017 kb on + strand, within EX28DRAFT_0270 at 232.018 kb on - strand, within EX28DRAFT_0270 at 232.018 kb on - strand, within EX28DRAFT_0270 at 232.196 kb on + strand, within EX28DRAFT_0270 at 232.197 kb on - strand, within EX28DRAFT_0270 at 232.197 kb on - strand, within EX28DRAFT_0270 at 232.204 kb on + strand, within EX28DRAFT_0270 at 232.205 kb on - strand, within EX28DRAFT_0270 at 232.205 kb on - strand, within EX28DRAFT_0270 at 232.205 kb on - strand, within EX28DRAFT_0270 at 232.205 kb on - strand, within EX28DRAFT_0270 at 232.245 kb on - strand, within EX28DRAFT_0270 at 232.317 kb on + strand, within EX28DRAFT_0270 at 232.317 kb on + strand, within EX28DRAFT_0270 at 232.355 kb on + strand, within EX28DRAFT_0270 at 232.431 kb on + strand, within EX28DRAFT_0270 at 232.511 kb on + strand at 232.512 kb on - strand at 232.626 kb on - strand at 232.630 kb on + strand at 232.776 kb on - strand at 232.776 kb on - strand at 232.801 kb on + strand at 232.820 kb on + strand, within EX28DRAFT_0271 at 232.820 kb on + strand, within EX28DRAFT_0271 at 232.821 kb on - strand, within EX28DRAFT_0271 at 233.111 kb on - strand, within EX28DRAFT_0271 at 233.582 kb on + strand, within EX28DRAFT_0271
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 230,401 + +0.1 230,405 + +0.4 230,406 - +0.1 230,440 + +0.4 230,440 + +0.7 230,471 + +0.6 230,473 + +0.1 230,628 + +0.6 230,734 - +0.1 230,775 + EX28DRAFT_0269 0.14 -0.6 230,776 - EX28DRAFT_0269 0.15 -0.1 230,821 + EX28DRAFT_0269 0.31 +0.4 230,821 + EX28DRAFT_0269 0.31 +0.3 231,074 - +0.3 231,077 - -0.3 231,090 + -0.9 231,112 - -1.6 231,243 - -0.6 231,295 - +0.3 231,295 - +1.5 231,295 - +0.7 231,315 + +0.8 231,345 - +0.5 231,572 - EX28DRAFT_0270 0.21 +0.3 231,738 + EX28DRAFT_0270 0.34 +0.5 231,806 + EX28DRAFT_0270 0.39 +2.0 231,807 - EX28DRAFT_0270 0.39 +0.3 231,982 + EX28DRAFT_0270 0.52 +0.5 231,982 + EX28DRAFT_0270 0.52 +1.0 231,984 + EX28DRAFT_0270 0.53 +0.4 231,984 + EX28DRAFT_0270 0.53 -1.1 232,017 + EX28DRAFT_0270 0.55 +0.5 232,018 - EX28DRAFT_0270 0.55 -0.2 232,018 - EX28DRAFT_0270 0.55 -0.7 232,196 + EX28DRAFT_0270 0.69 +0.4 232,197 - EX28DRAFT_0270 0.69 +0.5 232,197 - EX28DRAFT_0270 0.69 -0.1 232,204 + EX28DRAFT_0270 0.69 +0.2 232,205 - EX28DRAFT_0270 0.69 +0.5 232,205 - EX28DRAFT_0270 0.69 +0.4 232,205 - EX28DRAFT_0270 0.69 -0.4 232,205 - EX28DRAFT_0270 0.69 +0.1 232,245 - EX28DRAFT_0270 0.72 -1.8 232,317 + EX28DRAFT_0270 0.78 -1.1 232,317 + EX28DRAFT_0270 0.78 +0.3 232,355 + EX28DRAFT_0270 0.81 -0.1 232,431 + EX28DRAFT_0270 0.87 +0.0 232,511 + +0.3 232,512 - -2.8 232,626 - +0.4 232,630 + -0.1 232,776 - +0.6 232,776 - +1.0 232,801 + +0.9 232,820 + EX28DRAFT_0271 0.10 +0.9 232,820 + EX28DRAFT_0271 0.10 +0.7 232,821 - EX28DRAFT_0271 0.10 +1.5 233,111 - EX28DRAFT_0271 0.24 +0.5 233,582 + EX28DRAFT_0271 0.45 +0.3
Or see this region's nucleotide sequence