Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0085 and EX28DRAFT_0086 are separated by 117 nucleotides EX28DRAFT_0086 and EX28DRAFT_0087 are separated by 11 nucleotides
EX28DRAFT_0085: EX28DRAFT_0085 - transcriptional regulator, RpiR family, at 24,251 to 25,099
_0085
EX28DRAFT_0086: EX28DRAFT_0086 - N-acetylmuramic acid 6-phosphate etherase, at 25,217 to 26,110
_0086
EX28DRAFT_0087: EX28DRAFT_0087 - Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific, at 26,122 to 27,483
_0087
Position (kb) 25
26
27 Strain fitness (log2 ratio) -2
-1
0
1
2 at 24.244 kb on - strand at 24.245 kb on + strand at 24.245 kb on + strand at 24.246 kb on - strand at 24.412 kb on + strand, within EX28DRAFT_0085 at 24.413 kb on - strand, within EX28DRAFT_0085 at 24.413 kb on - strand, within EX28DRAFT_0085 at 24.414 kb on + strand, within EX28DRAFT_0085 at 24.414 kb on + strand, within EX28DRAFT_0085 at 24.416 kb on + strand, within EX28DRAFT_0085 at 24.416 kb on + strand, within EX28DRAFT_0085 at 24.417 kb on - strand, within EX28DRAFT_0085 at 24.417 kb on - strand, within EX28DRAFT_0085 at 24.538 kb on - strand, within EX28DRAFT_0085 at 24.920 kb on - strand, within EX28DRAFT_0085 at 25.089 kb on - strand at 25.100 kb on - strand at 25.319 kb on - strand, within EX28DRAFT_0086 at 25.416 kb on - strand, within EX28DRAFT_0086 at 25.416 kb on - strand, within EX28DRAFT_0086 at 25.416 kb on - strand, within EX28DRAFT_0086 at 25.598 kb on - strand, within EX28DRAFT_0086 at 25.652 kb on + strand, within EX28DRAFT_0086 at 25.653 kb on - strand, within EX28DRAFT_0086 at 25.834 kb on + strand, within EX28DRAFT_0086 at 25.874 kb on + strand, within EX28DRAFT_0086 at 26.108 kb on + strand at 26.121 kb on + strand at 26.431 kb on + strand, within EX28DRAFT_0087 at 26.499 kb on + strand, within EX28DRAFT_0087 at 26.576 kb on - strand, within EX28DRAFT_0087 at 27.088 kb on + strand, within EX28DRAFT_0087 at 27.090 kb on + strand, within EX28DRAFT_0087
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 24,244 - -0.1 24,245 + +1.0 24,245 + +0.0 24,246 - +0.2 24,412 + EX28DRAFT_0085 0.19 +0.1 24,413 - EX28DRAFT_0085 0.19 +0.6 24,413 - EX28DRAFT_0085 0.19 -0.7 24,414 + EX28DRAFT_0085 0.19 -1.0 24,414 + EX28DRAFT_0085 0.19 -1.1 24,416 + EX28DRAFT_0085 0.19 +0.5 24,416 + EX28DRAFT_0085 0.19 -0.8 24,417 - EX28DRAFT_0085 0.20 +0.7 24,417 - EX28DRAFT_0085 0.20 -1.7 24,538 - EX28DRAFT_0085 0.34 -0.7 24,920 - EX28DRAFT_0085 0.79 -1.9 25,089 - -1.2 25,100 - -0.5 25,319 - EX28DRAFT_0086 0.11 -0.7 25,416 - EX28DRAFT_0086 0.22 +0.9 25,416 - EX28DRAFT_0086 0.22 -0.2 25,416 - EX28DRAFT_0086 0.22 -1.3 25,598 - EX28DRAFT_0086 0.43 +0.0 25,652 + EX28DRAFT_0086 0.49 +0.2 25,653 - EX28DRAFT_0086 0.49 +0.5 25,834 + EX28DRAFT_0086 0.69 -0.2 25,874 + EX28DRAFT_0086 0.73 -0.1 26,108 + -2.3 26,121 + -0.8 26,431 + EX28DRAFT_0087 0.23 +2.1 26,499 + EX28DRAFT_0087 0.28 -0.1 26,576 - EX28DRAFT_0087 0.33 +0.6 27,088 + EX28DRAFT_0087 0.71 -0.2 27,090 + EX28DRAFT_0087 0.71 +0.0
Or see this region's nucleotide sequence