Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18040 and CA264_18045 are separated by 569 nucleotides CA264_18045 and CA264_18050 are separated by 75 nucleotides
CA264_18040: CA264_18040 - kynurenine 3-monooxygenase, at 4,194,476 to 4,195,843
_18040
CA264_18045: CA264_18045 - hypothetical protein, at 4,196,413 to 4,196,916
_18045
CA264_18050: CA264_18050 - hypothetical protein, at 4,196,992 to 4,198,557
_18050
Position (kb)
4196
4197 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4195.441 kb on + strand, within CA264_18040 at 4195.442 kb on - strand, within CA264_18040 at 4195.588 kb on - strand, within CA264_18040 at 4195.643 kb on + strand, within CA264_18040 at 4195.668 kb on - strand, within CA264_18040 at 4195.669 kb on + strand, within CA264_18040 at 4195.678 kb on + strand, within CA264_18040 at 4195.679 kb on - strand, within CA264_18040 at 4195.749 kb on + strand at 4195.771 kb on - strand at 4195.841 kb on + strand at 4195.841 kb on + strand at 4195.931 kb on + strand at 4195.931 kb on + strand at 4195.944 kb on - strand at 4195.967 kb on + strand at 4195.968 kb on - strand at 4196.102 kb on + strand at 4196.168 kb on + strand at 4196.168 kb on + strand at 4196.169 kb on - strand at 4196.169 kb on - strand at 4196.169 kb on - strand at 4196.169 kb on - strand at 4196.171 kb on - strand at 4196.180 kb on + strand at 4196.180 kb on + strand at 4196.181 kb on - strand at 4196.207 kb on - strand at 4196.225 kb on - strand at 4196.314 kb on - strand at 4196.346 kb on + strand at 4196.369 kb on - strand at 4196.370 kb on + strand at 4196.448 kb on - strand at 4196.448 kb on - strand at 4196.453 kb on + strand at 4196.454 kb on - strand at 4196.456 kb on + strand at 4196.456 kb on + strand at 4196.457 kb on - strand at 4196.457 kb on - strand at 4196.457 kb on - strand at 4196.457 kb on - strand at 4196.709 kb on - strand, within CA264_18045 at 4196.762 kb on + strand, within CA264_18045 at 4196.763 kb on - strand, within CA264_18045 at 4196.834 kb on - strand, within CA264_18045 at 4196.914 kb on + strand at 4197.105 kb on - strand at 4197.147 kb on - strand at 4197.167 kb on - strand, within CA264_18050 at 4197.194 kb on - strand, within CA264_18050 at 4197.279 kb on - strand, within CA264_18050 at 4197.302 kb on + strand, within CA264_18050 at 4197.305 kb on + strand, within CA264_18050 at 4197.316 kb on - strand, within CA264_18050 at 4197.321 kb on - strand, within CA264_18050 at 4197.338 kb on + strand, within CA264_18050 at 4197.338 kb on + strand, within CA264_18050 at 4197.392 kb on + strand, within CA264_18050 at 4197.458 kb on + strand, within CA264_18050 at 4197.494 kb on + strand, within CA264_18050 at 4197.648 kb on - strand, within CA264_18050 at 4197.651 kb on + strand, within CA264_18050 at 4197.652 kb on - strand, within CA264_18050 at 4197.653 kb on + strand, within CA264_18050 at 4197.653 kb on + strand, within CA264_18050 at 4197.727 kb on - strand, within CA264_18050 at 4197.878 kb on + strand, within CA264_18050 at 4197.903 kb on + strand, within CA264_18050 at 4197.904 kb on - strand, within CA264_18050
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 4,195,441 + CA264_18040 0.71 -0.7 4,195,442 - CA264_18040 0.71 -0.7 4,195,588 - CA264_18040 0.81 -0.6 4,195,643 + CA264_18040 0.85 +0.1 4,195,668 - CA264_18040 0.87 -0.7 4,195,669 + CA264_18040 0.87 +0.4 4,195,678 + CA264_18040 0.88 -0.4 4,195,679 - CA264_18040 0.88 -0.2 4,195,749 + -0.2 4,195,771 - -0.2 4,195,841 + -0.0 4,195,841 + +0.1 4,195,931 + +1.1 4,195,931 + +0.2 4,195,944 - -0.6 4,195,967 + +1.3 4,195,968 - -1.7 4,196,102 + +0.4 4,196,168 + -0.5 4,196,168 + +0.0 4,196,169 - -1.3 4,196,169 - -0.7 4,196,169 - +1.2 4,196,169 - +0.8 4,196,171 - -0.2 4,196,180 + -0.6 4,196,180 + -0.6 4,196,181 - -1.7 4,196,207 - +0.0 4,196,225 - -0.7 4,196,314 - -0.0 4,196,346 + +0.1 4,196,369 - +0.4 4,196,370 + +0.1 4,196,448 - -0.1 4,196,448 - -0.1 4,196,453 + +0.7 4,196,454 - +0.9 4,196,456 + +0.5 4,196,456 + +0.4 4,196,457 - -0.1 4,196,457 - +0.4 4,196,457 - -0.2 4,196,457 - -0.1 4,196,709 - CA264_18045 0.59 +0.1 4,196,762 + CA264_18045 0.69 -0.3 4,196,763 - CA264_18045 0.69 -0.1 4,196,834 - CA264_18045 0.84 -0.3 4,196,914 + +0.1 4,197,105 - -0.1 4,197,147 - +0.5 4,197,167 - CA264_18050 0.11 -0.1 4,197,194 - CA264_18050 0.13 -0.3 4,197,279 - CA264_18050 0.18 +0.1 4,197,302 + CA264_18050 0.20 -2.0 4,197,305 + CA264_18050 0.20 +0.0 4,197,316 - CA264_18050 0.21 -0.7 4,197,321 - CA264_18050 0.21 -0.4 4,197,338 + CA264_18050 0.22 -0.4 4,197,338 + CA264_18050 0.22 -0.8 4,197,392 + CA264_18050 0.26 -0.3 4,197,458 + CA264_18050 0.30 -1.9 4,197,494 + CA264_18050 0.32 -0.9 4,197,648 - CA264_18050 0.42 +1.9 4,197,651 + CA264_18050 0.42 -0.2 4,197,652 - CA264_18050 0.42 -0.0 4,197,653 + CA264_18050 0.42 -0.5 4,197,653 + CA264_18050 0.42 -0.1 4,197,727 - CA264_18050 0.47 -2.5 4,197,878 + CA264_18050 0.57 +0.6 4,197,903 + CA264_18050 0.58 -0.0 4,197,904 - CA264_18050 0.58 +1.5
Or see this region's nucleotide sequence