Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17890 and CA264_17895 are separated by 148 nucleotides CA264_17895 and CA264_17900 are separated by 235 nucleotides
CA264_17890: CA264_17890 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase, at 4,159,082 to 4,160,119
_17890
CA264_17895: CA264_17895 - protein-(glutamine-N5) methyltransferase, release factor-specific, at 4,160,268 to 4,161,122
_17895
CA264_17900: CA264_17900 - UDP-N-acetyl-D-galactosamine dehydrogenase, at 4,161,358 to 4,162,647
_17900
Position (kb)
4160
4161
4162 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4160.120 kb on - strand at 4160.145 kb on + strand at 4160.145 kb on + strand at 4160.213 kb on + strand at 4160.216 kb on + strand at 4160.224 kb on + strand at 4160.224 kb on + strand at 4160.844 kb on + strand, within CA264_17895 at 4161.143 kb on + strand at 4161.144 kb on - strand at 4161.244 kb on + strand at 4161.244 kb on + strand at 4161.244 kb on + strand at 4161.245 kb on - strand at 4161.245 kb on - strand at 4161.332 kb on + strand at 4161.345 kb on - strand at 4161.345 kb on - strand at 4161.345 kb on - strand at 4161.351 kb on + strand at 4161.355 kb on + strand at 4161.356 kb on - strand at 4161.356 kb on - strand at 4161.361 kb on + strand at 4161.376 kb on - strand at 4161.376 kb on - strand at 4161.399 kb on + strand at 4161.412 kb on + strand at 4161.413 kb on - strand at 4161.475 kb on - strand at 4161.475 kb on - strand at 4161.618 kb on + strand, within CA264_17900 at 4161.619 kb on - strand, within CA264_17900 at 4161.630 kb on + strand, within CA264_17900 at 4161.630 kb on + strand, within CA264_17900 at 4161.631 kb on - strand, within CA264_17900 at 4161.706 kb on + strand, within CA264_17900 at 4161.706 kb on + strand, within CA264_17900 at 4161.706 kb on + strand, within CA264_17900 at 4161.804 kb on + strand, within CA264_17900 at 4161.804 kb on + strand, within CA264_17900 at 4161.844 kb on - strand, within CA264_17900 at 4161.844 kb on - strand, within CA264_17900 at 4161.922 kb on + strand, within CA264_17900 at 4161.935 kb on + strand, within CA264_17900 at 4161.963 kb on + strand, within CA264_17900 at 4162.053 kb on + strand, within CA264_17900 at 4162.072 kb on + strand, within CA264_17900
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 4,160,120 - -1.0 4,160,145 + +0.2 4,160,145 + +0.5 4,160,213 + -1.8 4,160,216 + -0.3 4,160,224 + +0.4 4,160,224 + -0.5 4,160,844 + CA264_17895 0.67 +1.3 4,161,143 + +0.7 4,161,144 - +0.6 4,161,244 + +1.6 4,161,244 + -1.0 4,161,244 + +0.1 4,161,245 - +0.7 4,161,245 - +1.7 4,161,332 + +2.5 4,161,345 - +1.0 4,161,345 - -0.6 4,161,345 - +0.1 4,161,351 + +0.1 4,161,355 + +2.1 4,161,356 - -0.4 4,161,356 - +0.7 4,161,361 + +0.1 4,161,376 - -0.3 4,161,376 - +0.3 4,161,399 + -0.3 4,161,412 + -0.4 4,161,413 - -0.7 4,161,475 - +0.0 4,161,475 - -0.8 4,161,618 + CA264_17900 0.20 +0.1 4,161,619 - CA264_17900 0.20 -0.6 4,161,630 + CA264_17900 0.21 +0.4 4,161,630 + CA264_17900 0.21 +1.3 4,161,631 - CA264_17900 0.21 +1.0 4,161,706 + CA264_17900 0.27 -0.8 4,161,706 + CA264_17900 0.27 +0.1 4,161,706 + CA264_17900 0.27 -1.5 4,161,804 + CA264_17900 0.35 +0.8 4,161,804 + CA264_17900 0.35 -0.7 4,161,844 - CA264_17900 0.38 +1.0 4,161,844 - CA264_17900 0.38 +2.3 4,161,922 + CA264_17900 0.44 -0.6 4,161,935 + CA264_17900 0.45 +0.2 4,161,963 + CA264_17900 0.47 -0.8 4,162,053 + CA264_17900 0.54 +0.0 4,162,072 + CA264_17900 0.55 +0.5
Or see this region's nucleotide sequence