Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17835 and CA264_17840 are separated by 113 nucleotides CA264_17840 and CA264_17845 are separated by 32 nucleotides
CA264_17835: CA264_17835 - glutamyl-tRNA reductase, at 4,146,283 to 4,147,566
_17835
CA264_17840: CA264_17840 - ATP-binding protein, at 4,147,680 to 4,148,861
_17840
CA264_17845: CA264_17845 - GNAT family N-acetyltransferase, at 4,148,894 to 4,149,826
_17845
Position (kb)
4147
4148
4149 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4147.625 kb on - strand at 4147.636 kb on - strand at 4147.642 kb on - strand at 4147.642 kb on - strand at 4147.651 kb on + strand at 4147.692 kb on + strand at 4147.761 kb on - strand at 4147.761 kb on - strand at 4147.767 kb on - strand at 4147.769 kb on + strand at 4147.769 kb on + strand at 4147.774 kb on + strand at 4147.775 kb on - strand at 4147.775 kb on - strand at 4147.775 kb on - strand at 4147.775 kb on - strand at 4147.789 kb on + strand at 4147.821 kb on + strand, within CA264_17840 at 4147.878 kb on - strand, within CA264_17840 at 4147.943 kb on + strand, within CA264_17840 at 4147.955 kb on + strand, within CA264_17840 at 4147.967 kb on + strand, within CA264_17840 at 4148.315 kb on + strand, within CA264_17840 at 4148.496 kb on - strand, within CA264_17840 at 4148.522 kb on + strand, within CA264_17840 at 4148.523 kb on - strand, within CA264_17840 at 4148.526 kb on - strand, within CA264_17840 at 4148.536 kb on + strand, within CA264_17840 at 4148.613 kb on - strand, within CA264_17840 at 4148.803 kb on - strand at 4148.891 kb on + strand at 4148.904 kb on + strand at 4148.904 kb on + strand at 4148.905 kb on - strand at 4148.907 kb on + strand at 4148.927 kb on - strand at 4148.992 kb on + strand, within CA264_17845 at 4149.038 kb on + strand, within CA264_17845 at 4149.116 kb on + strand, within CA264_17845 at 4149.116 kb on + strand, within CA264_17845 at 4149.214 kb on + strand, within CA264_17845 at 4149.222 kb on - strand, within CA264_17845 at 4149.224 kb on - strand, within CA264_17845 at 4149.272 kb on + strand, within CA264_17845 at 4149.272 kb on + strand, within CA264_17845 at 4149.273 kb on - strand, within CA264_17845 at 4149.416 kb on + strand, within CA264_17845 at 4149.496 kb on - strand, within CA264_17845 at 4149.529 kb on + strand, within CA264_17845 at 4149.562 kb on - strand, within CA264_17845 at 4149.582 kb on - strand, within CA264_17845 at 4149.611 kb on + strand, within CA264_17845 at 4149.684 kb on + strand, within CA264_17845 at 4149.685 kb on - strand, within CA264_17845 at 4149.685 kb on - strand, within CA264_17845 at 4149.685 kb on - strand, within CA264_17845 at 4149.685 kb on - strand, within CA264_17845 at 4149.706 kb on + strand, within CA264_17845 at 4149.707 kb on - strand, within CA264_17845 at 4149.740 kb on + strand at 4149.740 kb on + strand at 4149.777 kb on - strand at 4149.835 kb on + strand at 4149.835 kb on + strand at 4149.836 kb on - strand at 4149.836 kb on - strand at 4149.836 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 4,147,625 - -0.5 4,147,636 - -1.0 4,147,642 - +0.4 4,147,642 - -0.2 4,147,651 + -0.0 4,147,692 + -0.3 4,147,761 - -1.1 4,147,761 - -3.1 4,147,767 - +1.9 4,147,769 + -1.9 4,147,769 + -0.5 4,147,774 + -3.2 4,147,775 - -1.5 4,147,775 - +0.9 4,147,775 - -2.0 4,147,775 - -1.4 4,147,789 + -1.1 4,147,821 + CA264_17840 0.12 -1.7 4,147,878 - CA264_17840 0.17 -2.0 4,147,943 + CA264_17840 0.22 -2.0 4,147,955 + CA264_17840 0.23 -1.7 4,147,967 + CA264_17840 0.24 -1.0 4,148,315 + CA264_17840 0.54 -1.1 4,148,496 - CA264_17840 0.69 -1.9 4,148,522 + CA264_17840 0.71 -0.8 4,148,523 - CA264_17840 0.71 -1.6 4,148,526 - CA264_17840 0.72 +0.1 4,148,536 + CA264_17840 0.72 -1.0 4,148,613 - CA264_17840 0.79 -1.0 4,148,803 - -2.0 4,148,891 + -0.4 4,148,904 + +0.6 4,148,904 + +0.4 4,148,905 - +0.5 4,148,907 + -0.2 4,148,927 - -0.6 4,148,992 + CA264_17845 0.11 -0.8 4,149,038 + CA264_17845 0.15 +0.7 4,149,116 + CA264_17845 0.24 -1.0 4,149,116 + CA264_17845 0.24 -2.8 4,149,214 + CA264_17845 0.34 -0.5 4,149,222 - CA264_17845 0.35 +0.4 4,149,224 - CA264_17845 0.35 -0.2 4,149,272 + CA264_17845 0.41 +0.3 4,149,272 + CA264_17845 0.41 -0.1 4,149,273 - CA264_17845 0.41 +0.7 4,149,416 + CA264_17845 0.56 -0.7 4,149,496 - CA264_17845 0.65 +0.2 4,149,529 + CA264_17845 0.68 -0.5 4,149,562 - CA264_17845 0.72 +0.1 4,149,582 - CA264_17845 0.74 +0.0 4,149,611 + CA264_17845 0.77 +0.4 4,149,684 + CA264_17845 0.85 +0.1 4,149,685 - CA264_17845 0.85 +0.4 4,149,685 - CA264_17845 0.85 -0.2 4,149,685 - CA264_17845 0.85 +0.6 4,149,685 - CA264_17845 0.85 +0.1 4,149,706 + CA264_17845 0.87 -0.1 4,149,707 - CA264_17845 0.87 -0.2 4,149,740 + +0.1 4,149,740 + +0.1 4,149,777 - +0.4 4,149,835 + -0.1 4,149,835 + +0.1 4,149,836 - -0.1 4,149,836 - -1.2 4,149,836 - +0.1
Or see this region's nucleotide sequence