Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16620 and CA264_16625 are separated by 0 nucleotides CA264_16625 and CA264_16630 are separated by 108 nucleotides CA264_16630 and CA264_16635 are separated by 595 nucleotides
CA264_16620: CA264_16620 - hypothetical protein, at 3,863,652 to 3,865,187
_16620
CA264_16625: CA264_16625 - SAM-dependent methyltransferase, at 3,865,188 to 3,865,919
_16625
CA264_16630: CA264_16630 - DUF58 domain-containing protein, at 3,866,028 to 3,866,924
_16630
CA264_16635: CA264_16635 - AAA family ATPase, at 3,867,520 to 3,868,515
_16635
Position (kb)
3866
3867 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3865.105 kb on - strand at 3865.130 kb on - strand at 3865.157 kb on - strand at 3865.200 kb on + strand at 3865.248 kb on + strand at 3865.249 kb on - strand at 3865.337 kb on - strand, within CA264_16625 at 3865.366 kb on + strand, within CA264_16625 at 3865.367 kb on - strand, within CA264_16625 at 3865.371 kb on - strand, within CA264_16625 at 3865.459 kb on + strand, within CA264_16625 at 3865.470 kb on + strand, within CA264_16625 at 3865.473 kb on - strand, within CA264_16625 at 3865.481 kb on - strand, within CA264_16625 at 3865.481 kb on - strand, within CA264_16625 at 3865.495 kb on - strand, within CA264_16625 at 3865.499 kb on + strand, within CA264_16625 at 3865.499 kb on + strand, within CA264_16625 at 3865.503 kb on + strand, within CA264_16625 at 3865.515 kb on - strand, within CA264_16625 at 3865.532 kb on - strand, within CA264_16625 at 3865.585 kb on + strand, within CA264_16625 at 3865.629 kb on + strand, within CA264_16625 at 3865.630 kb on - strand, within CA264_16625 at 3865.658 kb on + strand, within CA264_16625 at 3865.677 kb on + strand, within CA264_16625 at 3865.685 kb on - strand, within CA264_16625 at 3865.744 kb on - strand, within CA264_16625 at 3865.744 kb on - strand, within CA264_16625 at 3865.865 kb on - strand at 3865.876 kb on + strand at 3865.876 kb on + strand at 3865.910 kb on + strand at 3865.935 kb on + strand at 3865.935 kb on + strand at 3865.936 kb on - strand at 3865.936 kb on - strand at 3865.936 kb on - strand at 3865.939 kb on + strand at 3865.939 kb on + strand at 3866.069 kb on + strand at 3866.073 kb on + strand at 3866.073 kb on + strand at 3866.163 kb on + strand, within CA264_16630 at 3866.164 kb on - strand, within CA264_16630 at 3866.193 kb on + strand, within CA264_16630 at 3866.194 kb on - strand, within CA264_16630 at 3866.194 kb on - strand, within CA264_16630 at 3866.311 kb on - strand, within CA264_16630 at 3866.317 kb on + strand, within CA264_16630 at 3866.332 kb on - strand, within CA264_16630 at 3866.351 kb on - strand, within CA264_16630 at 3866.351 kb on - strand, within CA264_16630 at 3866.406 kb on - strand, within CA264_16630 at 3866.446 kb on - strand, within CA264_16630 at 3866.486 kb on + strand, within CA264_16630 at 3866.533 kb on + strand, within CA264_16630 at 3866.533 kb on + strand, within CA264_16630 at 3866.533 kb on + strand, within CA264_16630 at 3866.534 kb on - strand, within CA264_16630 at 3866.569 kb on + strand, within CA264_16630 at 3866.615 kb on + strand, within CA264_16630 at 3866.659 kb on - strand, within CA264_16630 at 3866.660 kb on + strand, within CA264_16630 at 3866.704 kb on + strand, within CA264_16630 at 3866.704 kb on + strand, within CA264_16630 at 3866.704 kb on + strand, within CA264_16630 at 3866.705 kb on - strand, within CA264_16630 at 3866.705 kb on - strand, within CA264_16630 at 3866.705 kb on - strand, within CA264_16630 at 3866.705 kb on - strand, within CA264_16630 at 3866.705 kb on - strand, within CA264_16630 at 3866.767 kb on + strand, within CA264_16630 at 3866.832 kb on - strand, within CA264_16630 at 3866.875 kb on - strand at 3866.937 kb on - strand at 3866.942 kb on - strand at 3866.949 kb on - strand at 3867.002 kb on + strand at 3867.033 kb on + strand at 3867.138 kb on + strand at 3867.138 kb on + strand at 3867.141 kb on + strand at 3867.142 kb on - strand at 3867.142 kb on - strand at 3867.142 kb on - strand at 3867.143 kb on + strand at 3867.144 kb on - strand at 3867.144 kb on - strand at 3867.146 kb on + strand at 3867.147 kb on - strand at 3867.148 kb on + strand at 3867.171 kb on + strand at 3867.187 kb on + strand at 3867.253 kb on - strand at 3867.453 kb on - strand at 3867.482 kb on + strand at 3867.521 kb on + strand at 3867.522 kb on - strand at 3867.527 kb on - strand at 3867.569 kb on - strand at 3867.655 kb on - strand, within CA264_16635 at 3867.658 kb on - strand, within CA264_16635 at 3867.671 kb on - strand, within CA264_16635 at 3867.671 kb on - strand, within CA264_16635 at 3867.688 kb on + strand, within CA264_16635 at 3867.715 kb on + strand, within CA264_16635 at 3867.715 kb on + strand, within CA264_16635 at 3867.715 kb on + strand, within CA264_16635 at 3867.715 kb on + strand, within CA264_16635 at 3867.716 kb on - strand, within CA264_16635 at 3867.716 kb on - strand, within CA264_16635 at 3867.716 kb on - strand, within CA264_16635 at 3867.716 kb on - strand, within CA264_16635 at 3867.718 kb on - strand, within CA264_16635 at 3867.718 kb on - strand, within CA264_16635 at 3867.718 kb on - strand, within CA264_16635 at 3867.759 kb on - strand, within CA264_16635 at 3867.776 kb on - strand, within CA264_16635 at 3867.817 kb on + strand, within CA264_16635 at 3867.821 kb on + strand, within CA264_16635 at 3867.821 kb on + strand, within CA264_16635 at 3867.822 kb on - strand, within CA264_16635 at 3867.822 kb on - strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.826 kb on - strand, within CA264_16635 at 3867.847 kb on + strand, within CA264_16635 at 3867.847 kb on + strand, within CA264_16635 at 3867.848 kb on - strand, within CA264_16635 at 3867.904 kb on + strand, within CA264_16635
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 3,865,105 - +0.0 3,865,130 - -0.0 3,865,157 - +0.5 3,865,200 + -1.9 3,865,248 + +0.2 3,865,249 - -0.8 3,865,337 - CA264_16625 0.20 -0.1 3,865,366 + CA264_16625 0.24 -0.1 3,865,367 - CA264_16625 0.24 -0.1 3,865,371 - CA264_16625 0.25 -0.2 3,865,459 + CA264_16625 0.37 -0.2 3,865,470 + CA264_16625 0.39 -1.0 3,865,473 - CA264_16625 0.39 +1.8 3,865,481 - CA264_16625 0.40 +0.5 3,865,481 - CA264_16625 0.40 -0.0 3,865,495 - CA264_16625 0.42 +0.1 3,865,499 + CA264_16625 0.42 -0.5 3,865,499 + CA264_16625 0.42 +0.6 3,865,503 + CA264_16625 0.43 -0.3 3,865,515 - CA264_16625 0.45 +0.6 3,865,532 - CA264_16625 0.47 -0.4 3,865,585 + CA264_16625 0.54 -0.5 3,865,629 + CA264_16625 0.60 +0.3 3,865,630 - CA264_16625 0.60 -0.3 3,865,658 + CA264_16625 0.64 +0.2 3,865,677 + CA264_16625 0.67 -0.2 3,865,685 - CA264_16625 0.68 -0.4 3,865,744 - CA264_16625 0.76 +0.6 3,865,744 - CA264_16625 0.76 +0.3 3,865,865 - -2.1 3,865,876 + -0.4 3,865,876 + +1.5 3,865,910 + +0.3 3,865,935 + +0.1 3,865,935 + +0.5 3,865,936 - +0.0 3,865,936 - +0.1 3,865,936 - +0.3 3,865,939 + -0.2 3,865,939 + -0.6 3,866,069 + +0.1 3,866,073 + +0.7 3,866,073 + -0.4 3,866,163 + CA264_16630 0.15 +0.9 3,866,164 - CA264_16630 0.15 +0.2 3,866,193 + CA264_16630 0.18 +0.3 3,866,194 - CA264_16630 0.19 +0.1 3,866,194 - CA264_16630 0.19 +0.4 3,866,311 - CA264_16630 0.32 -0.6 3,866,317 + CA264_16630 0.32 +0.3 3,866,332 - CA264_16630 0.34 +0.4 3,866,351 - CA264_16630 0.36 +0.4 3,866,351 - CA264_16630 0.36 +0.3 3,866,406 - CA264_16630 0.42 +0.1 3,866,446 - CA264_16630 0.47 +0.8 3,866,486 + CA264_16630 0.51 +0.6 3,866,533 + CA264_16630 0.56 +0.6 3,866,533 + CA264_16630 0.56 +0.9 3,866,533 + CA264_16630 0.56 -0.2 3,866,534 - CA264_16630 0.56 +0.1 3,866,569 + CA264_16630 0.60 -0.1 3,866,615 + CA264_16630 0.65 +0.1 3,866,659 - CA264_16630 0.70 +0.9 3,866,660 + CA264_16630 0.70 -0.4 3,866,704 + CA264_16630 0.75 -1.3 3,866,704 + CA264_16630 0.75 +0.2 3,866,704 + CA264_16630 0.75 -0.2 3,866,705 - CA264_16630 0.75 +0.3 3,866,705 - CA264_16630 0.75 -0.4 3,866,705 - CA264_16630 0.75 +0.1 3,866,705 - CA264_16630 0.75 +0.3 3,866,705 - CA264_16630 0.75 +0.3 3,866,767 + CA264_16630 0.82 +0.5 3,866,832 - CA264_16630 0.90 -0.5 3,866,875 - +0.0 3,866,937 - -0.3 3,866,942 - +0.1 3,866,949 - +0.3 3,867,002 + +0.0 3,867,033 + -0.0 3,867,138 + -0.2 3,867,138 + +0.3 3,867,141 + +1.3 3,867,142 - +0.7 3,867,142 - +1.0 3,867,142 - -0.1 3,867,143 + -0.4 3,867,144 - -0.0 3,867,144 - +0.7 3,867,146 + +0.4 3,867,147 - +0.8 3,867,148 + +1.0 3,867,171 + -0.5 3,867,187 + +1.0 3,867,253 - +0.4 3,867,453 - -0.7 3,867,482 + -0.1 3,867,521 + -0.1 3,867,522 - +0.1 3,867,527 - -0.5 3,867,569 - +0.1 3,867,655 - CA264_16635 0.14 +0.3 3,867,658 - CA264_16635 0.14 +0.6 3,867,671 - CA264_16635 0.15 +1.1 3,867,671 - CA264_16635 0.15 +1.1 3,867,688 + CA264_16635 0.17 +0.3 3,867,715 + CA264_16635 0.20 +0.9 3,867,715 + CA264_16635 0.20 -0.2 3,867,715 + CA264_16635 0.20 +0.4 3,867,715 + CA264_16635 0.20 +0.6 3,867,716 - CA264_16635 0.20 +0.1 3,867,716 - CA264_16635 0.20 -0.2 3,867,716 - CA264_16635 0.20 -1.2 3,867,716 - CA264_16635 0.20 +1.0 3,867,718 - CA264_16635 0.20 -2.2 3,867,718 - CA264_16635 0.20 +0.1 3,867,718 - CA264_16635 0.20 -0.3 3,867,759 - CA264_16635 0.24 -0.3 3,867,776 - CA264_16635 0.26 +0.0 3,867,817 + CA264_16635 0.30 +0.4 3,867,821 + CA264_16635 0.30 -0.4 3,867,821 + CA264_16635 0.30 -0.3 3,867,822 - CA264_16635 0.30 +0.5 3,867,822 - CA264_16635 0.30 -0.0 3,867,825 + CA264_16635 0.31 +1.4 3,867,825 + CA264_16635 0.31 -0.4 3,867,825 + CA264_16635 0.31 -0.5 3,867,825 + CA264_16635 0.31 +0.5 3,867,825 + CA264_16635 0.31 -0.8 3,867,825 + CA264_16635 0.31 -0.9 3,867,825 + CA264_16635 0.31 +0.2 3,867,826 - CA264_16635 0.31 -1.1 3,867,847 + CA264_16635 0.33 -0.0 3,867,847 + CA264_16635 0.33 +0.1 3,867,848 - CA264_16635 0.33 +0.5 3,867,904 + CA264_16635 0.39 -0.2
Or see this region's nucleotide sequence