Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13235 and CA264_13240 are separated by 136 nucleotides CA264_13240 and CA264_13245 are separated by 73 nucleotides CA264_13245 and CA264_13250 overlap by 8 nucleotides
CA264_13235: CA264_13235 - DNA repair protein RecN, at 3,083,507 to 3,085,204
_13235
CA264_13240: CA264_13240 - hypothetical protein, at 3,085,341 to 3,085,571
_13240
CA264_13245: CA264_13245 - DUF4835 domain-containing protein, at 3,085,645 to 3,086,550
_13245
CA264_13250: CA264_13250 - phosphopantothenoylcysteine decarboxylase, at 3,086,543 to 3,087,746
_13250
Position (kb)
3085
3086
3087 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3084.722 kb on - strand, within CA264_13235 at 3084.762 kb on + strand, within CA264_13235 at 3084.762 kb on + strand, within CA264_13235 at 3084.762 kb on + strand, within CA264_13235 at 3084.762 kb on + strand, within CA264_13235 at 3084.763 kb on - strand, within CA264_13235 at 3084.786 kb on + strand, within CA264_13235 at 3084.787 kb on - strand, within CA264_13235 at 3084.787 kb on - strand, within CA264_13235 at 3084.934 kb on + strand, within CA264_13235 at 3084.985 kb on + strand, within CA264_13235 at 3084.985 kb on + strand, within CA264_13235 at 3084.986 kb on - strand, within CA264_13235 at 3084.988 kb on - strand, within CA264_13235 at 3084.996 kb on - strand, within CA264_13235 at 3085.052 kb on - strand at 3085.204 kb on + strand at 3085.204 kb on + strand at 3085.204 kb on + strand at 3085.205 kb on - strand at 3085.205 kb on - strand at 3085.205 kb on - strand at 3085.206 kb on + strand at 3085.206 kb on + strand at 3085.206 kb on + strand at 3085.207 kb on - strand at 3085.209 kb on + strand at 3085.210 kb on - strand at 3085.225 kb on - strand at 3085.230 kb on + strand at 3085.230 kb on + strand at 3085.230 kb on + strand at 3085.231 kb on - strand at 3085.343 kb on - strand at 3085.356 kb on + strand at 3085.398 kb on - strand, within CA264_13240 at 3085.398 kb on - strand, within CA264_13240 at 3085.485 kb on - strand, within CA264_13240 at 3085.489 kb on - strand, within CA264_13240 at 3085.571 kb on + strand at 3085.572 kb on - strand at 3085.577 kb on + strand at 3085.577 kb on + strand at 3085.578 kb on - strand at 3085.578 kb on - strand at 3085.581 kb on + strand at 3085.582 kb on - strand at 3085.583 kb on + strand at 3085.668 kb on - strand at 3085.699 kb on + strand at 3085.700 kb on - strand at 3085.700 kb on - strand at 3085.709 kb on + strand at 3085.793 kb on - strand, within CA264_13245 at 3085.793 kb on - strand, within CA264_13245 at 3085.913 kb on + strand, within CA264_13245 at 3085.913 kb on + strand, within CA264_13245 at 3085.971 kb on - strand, within CA264_13245 at 3086.037 kb on + strand, within CA264_13245 at 3086.037 kb on + strand, within CA264_13245 at 3086.038 kb on - strand, within CA264_13245 at 3086.041 kb on + strand, within CA264_13245 at 3086.042 kb on - strand, within CA264_13245 at 3086.043 kb on + strand, within CA264_13245 at 3086.043 kb on + strand, within CA264_13245 at 3086.118 kb on - strand, within CA264_13245 at 3086.118 kb on - strand, within CA264_13245 at 3086.118 kb on - strand, within CA264_13245 at 3086.123 kb on + strand, within CA264_13245 at 3086.123 kb on + strand, within CA264_13245 at 3086.124 kb on - strand, within CA264_13245 at 3086.156 kb on + strand, within CA264_13245 at 3086.157 kb on - strand, within CA264_13245 at 3086.214 kb on + strand, within CA264_13245 at 3086.215 kb on - strand, within CA264_13245 at 3086.218 kb on + strand, within CA264_13245 at 3086.219 kb on - strand, within CA264_13245 at 3086.221 kb on - strand, within CA264_13245 at 3086.255 kb on + strand, within CA264_13245 at 3086.293 kb on - strand, within CA264_13245 at 3086.363 kb on + strand, within CA264_13245 at 3086.395 kb on - strand, within CA264_13245 at 3086.419 kb on - strand, within CA264_13245 at 3086.450 kb on - strand, within CA264_13245 at 3086.512 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 3,084,722 - CA264_13235 0.72 +1.3 3,084,762 + CA264_13235 0.74 -0.5 3,084,762 + CA264_13235 0.74 -0.4 3,084,762 + CA264_13235 0.74 +0.2 3,084,762 + CA264_13235 0.74 -0.9 3,084,763 - CA264_13235 0.74 -0.7 3,084,786 + CA264_13235 0.75 +0.2 3,084,787 - CA264_13235 0.75 -0.1 3,084,787 - CA264_13235 0.75 +1.4 3,084,934 + CA264_13235 0.84 +0.2 3,084,985 + CA264_13235 0.87 -0.6 3,084,985 + CA264_13235 0.87 -0.1 3,084,986 - CA264_13235 0.87 -0.3 3,084,988 - CA264_13235 0.87 -0.1 3,084,996 - CA264_13235 0.88 +0.2 3,085,052 - -0.6 3,085,204 + -0.4 3,085,204 + +0.6 3,085,204 + +2.8 3,085,205 - -0.9 3,085,205 - -0.6 3,085,205 - -0.5 3,085,206 + +0.3 3,085,206 + -0.6 3,085,206 + -0.6 3,085,207 - +0.5 3,085,209 + -0.2 3,085,210 - +0.1 3,085,225 - -0.1 3,085,230 + -0.1 3,085,230 + -0.2 3,085,230 + +1.5 3,085,231 - -1.1 3,085,343 - -0.1 3,085,356 + -0.1 3,085,398 - CA264_13240 0.25 +1.0 3,085,398 - CA264_13240 0.25 +0.6 3,085,485 - CA264_13240 0.62 +0.4 3,085,489 - CA264_13240 0.64 -1.9 3,085,571 + -0.4 3,085,572 - -0.7 3,085,577 + -0.3 3,085,577 + +0.9 3,085,578 - -1.1 3,085,578 - +0.1 3,085,581 + -0.7 3,085,582 - +0.0 3,085,583 + -2.6 3,085,668 - +0.2 3,085,699 + +0.8 3,085,700 - -0.3 3,085,700 - +0.3 3,085,709 + -0.1 3,085,793 - CA264_13245 0.16 -1.7 3,085,793 - CA264_13245 0.16 -0.0 3,085,913 + CA264_13245 0.30 -0.2 3,085,913 + CA264_13245 0.30 +0.3 3,085,971 - CA264_13245 0.36 +0.4 3,086,037 + CA264_13245 0.43 -1.1 3,086,037 + CA264_13245 0.43 -1.3 3,086,038 - CA264_13245 0.43 -0.5 3,086,041 + CA264_13245 0.44 -1.3 3,086,042 - CA264_13245 0.44 +0.1 3,086,043 + CA264_13245 0.44 -1.1 3,086,043 + CA264_13245 0.44 +0.4 3,086,118 - CA264_13245 0.52 -0.6 3,086,118 - CA264_13245 0.52 -0.5 3,086,118 - CA264_13245 0.52 -1.6 3,086,123 + CA264_13245 0.53 -0.5 3,086,123 + CA264_13245 0.53 -0.2 3,086,124 - CA264_13245 0.53 -2.1 3,086,156 + CA264_13245 0.56 +0.3 3,086,157 - CA264_13245 0.57 -0.8 3,086,214 + CA264_13245 0.63 -0.4 3,086,215 - CA264_13245 0.63 -0.0 3,086,218 + CA264_13245 0.63 -0.5 3,086,219 - CA264_13245 0.63 -0.8 3,086,221 - CA264_13245 0.64 -0.0 3,086,255 + CA264_13245 0.67 -0.5 3,086,293 - CA264_13245 0.72 -1.1 3,086,363 + CA264_13245 0.79 -0.3 3,086,395 - CA264_13245 0.83 +0.2 3,086,419 - CA264_13245 0.85 +1.2 3,086,450 - CA264_13245 0.89 -0.1 3,086,512 - +0.2
Or see this region's nucleotide sequence