Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13105 and CA264_13110 are separated by 134 nucleotides CA264_13110 and CA264_13115 are separated by 271 nucleotides
CA264_13105: CA264_13105 - 3-dehydroquinate synthase, at 3,056,793 to 3,057,830
_13105
CA264_13110: CA264_13110 - 3-deoxy-7-phosphoheptulonate synthase, at 3,057,965 to 3,059,062
_13110
CA264_13115: CA264_13115 - proline dehydrogenase, at 3,059,334 to 3,060,521
_13115
Position (kb)
3057
3058
3059
3060 Strain fitness (log2 ratio)
-1
0
1
2 at 3057.422 kb on + strand, within CA264_13105 at 3057.812 kb on + strand at 3057.816 kb on + strand at 3057.816 kb on + strand at 3057.816 kb on + strand at 3057.817 kb on - strand at 3057.865 kb on - strand at 3057.967 kb on - strand at 3057.967 kb on - strand at 3058.139 kb on - strand, within CA264_13110 at 3058.190 kb on - strand, within CA264_13110 at 3058.261 kb on - strand, within CA264_13110 at 3058.261 kb on - strand, within CA264_13110 at 3058.270 kb on + strand, within CA264_13110 at 3058.289 kb on + strand, within CA264_13110 at 3058.290 kb on - strand, within CA264_13110 at 3058.525 kb on - strand, within CA264_13110 at 3058.540 kb on - strand, within CA264_13110 at 3058.559 kb on + strand, within CA264_13110 at 3058.709 kb on + strand, within CA264_13110 at 3058.914 kb on - strand, within CA264_13110 at 3059.045 kb on - strand at 3059.083 kb on + strand at 3059.084 kb on - strand at 3059.084 kb on - strand at 3059.115 kb on - strand at 3059.173 kb on + strand at 3059.193 kb on + strand at 3059.209 kb on + strand at 3059.209 kb on + strand at 3059.224 kb on - strand at 3059.255 kb on - strand at 3059.324 kb on + strand at 3059.324 kb on + strand at 3059.325 kb on - strand at 3059.325 kb on - strand at 3059.327 kb on + strand at 3059.327 kb on + strand at 3059.349 kb on - strand at 3059.405 kb on - strand at 3059.405 kb on - strand at 3059.405 kb on - strand at 3059.405 kb on - strand at 3059.408 kb on + strand at 3059.409 kb on - strand at 3059.415 kb on + strand at 3059.416 kb on - strand at 3059.416 kb on - strand at 3059.416 kb on - strand at 3059.426 kb on + strand at 3059.426 kb on + strand at 3059.427 kb on - strand at 3059.596 kb on - strand, within CA264_13115 at 3059.614 kb on + strand, within CA264_13115 at 3059.729 kb on + strand, within CA264_13115 at 3059.928 kb on + strand, within CA264_13115 at 3059.929 kb on - strand, within CA264_13115 at 3059.946 kb on + strand, within CA264_13115 at 3059.949 kb on - strand, within CA264_13115 at 3059.970 kb on + strand, within CA264_13115 at 3059.970 kb on + strand, within CA264_13115 at 3059.971 kb on - strand, within CA264_13115 at 3059.971 kb on - strand, within CA264_13115 at 3059.976 kb on - strand, within CA264_13115 at 3059.979 kb on + strand, within CA264_13115 at 3059.979 kb on + strand, within CA264_13115 at 3059.979 kb on + strand, within CA264_13115 at 3059.979 kb on + strand, within CA264_13115 at 3059.980 kb on - strand, within CA264_13115 at 3059.980 kb on - strand, within CA264_13115 at 3059.980 kb on - strand, within CA264_13115 at 3059.989 kb on - strand, within CA264_13115 at 3060.051 kb on + strand, within CA264_13115 at 3060.051 kb on + strand, within CA264_13115
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 3,057,422 + CA264_13105 0.61 +0.1 3,057,812 + -0.9 3,057,816 + +2.0 3,057,816 + +0.2 3,057,816 + +1.1 3,057,817 - -0.7 3,057,865 - -0.6 3,057,967 - +0.3 3,057,967 - +0.6 3,058,139 - CA264_13110 0.16 -0.4 3,058,190 - CA264_13110 0.20 +1.7 3,058,261 - CA264_13110 0.27 +1.4 3,058,261 - CA264_13110 0.27 -0.5 3,058,270 + CA264_13110 0.28 -0.2 3,058,289 + CA264_13110 0.30 +0.5 3,058,290 - CA264_13110 0.30 +0.5 3,058,525 - CA264_13110 0.51 +0.1 3,058,540 - CA264_13110 0.52 -0.2 3,058,559 + CA264_13110 0.54 +0.1 3,058,709 + CA264_13110 0.68 -0.1 3,058,914 - CA264_13110 0.86 -1.0 3,059,045 - +1.4 3,059,083 + +0.9 3,059,084 - +0.5 3,059,084 - +0.9 3,059,115 - -0.1 3,059,173 + -0.0 3,059,193 + +0.0 3,059,209 + -0.0 3,059,209 + -0.5 3,059,224 - -0.1 3,059,255 - -0.2 3,059,324 + +0.0 3,059,324 + +0.2 3,059,325 - +0.0 3,059,325 - -0.0 3,059,327 + -0.6 3,059,327 + -1.5 3,059,349 - -1.2 3,059,405 - -0.1 3,059,405 - +0.3 3,059,405 - -0.0 3,059,405 - +0.6 3,059,408 + -0.4 3,059,409 - +0.5 3,059,415 + -0.3 3,059,416 - +0.4 3,059,416 - +0.2 3,059,416 - -0.3 3,059,426 + +0.5 3,059,426 + +0.6 3,059,427 - +0.1 3,059,596 - CA264_13115 0.22 +0.3 3,059,614 + CA264_13115 0.24 -0.2 3,059,729 + CA264_13115 0.33 +0.7 3,059,928 + CA264_13115 0.50 -0.1 3,059,929 - CA264_13115 0.50 +0.0 3,059,946 + CA264_13115 0.52 +0.1 3,059,949 - CA264_13115 0.52 +0.0 3,059,970 + CA264_13115 0.54 +0.4 3,059,970 + CA264_13115 0.54 +1.1 3,059,971 - CA264_13115 0.54 +0.1 3,059,971 - CA264_13115 0.54 -0.0 3,059,976 - CA264_13115 0.54 -0.1 3,059,979 + CA264_13115 0.54 -0.5 3,059,979 + CA264_13115 0.54 -0.2 3,059,979 + CA264_13115 0.54 +1.2 3,059,979 + CA264_13115 0.54 -0.1 3,059,980 - CA264_13115 0.54 -1.6 3,059,980 - CA264_13115 0.54 +0.1 3,059,980 - CA264_13115 0.54 +0.2 3,059,989 - CA264_13115 0.55 -0.9 3,060,051 + CA264_13115 0.60 +1.1 3,060,051 + CA264_13115 0.60 +0.4
Or see this region's nucleotide sequence